Factsheet for TraesCS6A01G329800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G308700.1	Wheat	plasma membrane	91.35	93.73
TraesCS6B01G360600.1	Wheat	plasma membrane	90.59	92.23
HORVU6Hr1G080150.1	Barley	plasma membrane	88.3	87.63
TraesCS6A01G329700.1	Wheat	plasma membrane	83.46	85.19
TraesCS6A01G330000.1	Wheat	extracellular, golgi, plastid, vacuole	34.61	85.0
TraesCS6A01G330100.1	Wheat	plasma membrane	82.95	84.02
TraesCS6A01G329900.1	Wheat	plasma membrane	81.17	82.86
TraesCS6A01G329600.1	Wheat	plasma membrane	79.64	80.88
Zm00001d018195_P001	Maize	plasma membrane	75.83	75.63
EES07591	Sorghum	golgi, plasma membrane	73.28	74.81
Os02t0768300-01	Rice	golgi, plasma membrane	71.25	72.92
TraesCS7A01G169100.1	Wheat	plasma membrane	61.58	62.37
GSMUA_Achr7P13070_001	Banana	golgi, plasma membrane, vacuole	54.2	57.1
TraesCS7A01G490000.1	Wheat	plasma membrane	51.4	52.74
TraesCS1A01G310300.1	Wheat	plasma membrane	45.8	46.27
TraesCS3A01G331900.1	Wheat	golgi, plasma membrane, vacuole	44.78	46.07
TraesCS1A01G256700.1	Wheat	peroxisome	44.27	43.18
TraesCS4A01G415600.1	Wheat	plasma membrane	32.06	33.78
TraesCS3A01G007100.1	Wheat	golgi, plasma membrane, vacuole	31.81	32.64
TraesCS3A01G019600.1	Wheat	plasma membrane	30.53	32.52
TraesCS7A01G281700.1	Wheat	plasma membrane	24.68	31.19
TraesCS7A01G409900.1	Wheat	plasma membrane	25.95	25.56
TraesCS6A01G271500.1	Wheat	plasma membrane	24.68	22.25

Protein Annotations

EnsemblPlants:TraesCS6A01G329800.1	EnsemblPlantsGene:TraesCS6A01G329800	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	InterPro:EamA_dom	InterPro:WAT1-related
PANTHER:PTHR31218	PANTHER:PTHR31218:SF21	PFAM:PF00892	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix
MapMan:24.2.1.5	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:562794899..562797916

Molecular Weight (calculated)

41819.2 Da

IEP (calculated)

9.970

GRAVY (calculated)

0.637

Length

393 amino acids

Sequence
(BLAST)

001: MGMGWKVVSD VKPYLAMVLL QVGFAGMYII AVASLKAGMS HFVLVVYRNL VATAVMTPFA LYFERGRRPK MSTTIFLKIM GLAILEPVID QNLYFLGAKL
101: TSAGFATALL NTLPAVTFVL ALILRMEKVR LRSLHSQAKI AGTVLTVAGA VLMILYHGPA MQFPWTKGQH HATAGGQGAV GAAAARDWLK GTMMLIGSCM
201: VWSCFFILQS STLRSYPAEL SVTALICGMG SLMSGAVAVV AERANTHAWV IGFDTRLLTV VYAGIVCSGV AYYLQGVVSR QRGPVFVTAF NPLCMIITAV
301: MGSIILKEEI TLGSVIGAVI IVAGLYFLIW GKSKDKIIIS PSQLSDVSVK GAGALPLTLA TNGHGHIKQH ELGNGNGNGG HVDVETPVTN GHY

Best Arabidopsis Sequence Match ( AT2G37460.1 )
(BLAST)

001: MEEVKKRDCM EKARPFISMV VLQVGLAGMD ILSKAVLNKG MSNYVLVVYR HAVATIVMAP FAFYFDKKVR PKMTLMIFFK ISLLGLLEPV IDQNLYYLGM
101: KYTTATFATA MYNVLPAITF VLAYIFGLER VKLRCIRSTG KVVGTLATVG GAMIMTLVKG PVLDLFWTKG VSAHNTAGTD IHSAIKGAVL VTIGCFSYAC
201: FMILQAITLR TYPAELSLTA WICLMGTIEG TAVALVMEKG NPSAWAIGWD TKLLTATYSG IVCSALAYYV GGVVMKTRGP VFVTAFSPLC MIIVAIMSTI
301: IFAEQMYLGR VLGAVVICAG LYLVIWGKGK DYKYNSTLQL DDESAQPKLE LSGNGKDNVD HEVITISKQG EQRRTAVETV

Arabidopsis Description

WAT1-related protein At2g37460 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUS1]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.