Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G308700.1 | Wheat | plasma membrane | 91.45 | 92.17 |
| TraesCS6A01G329800.1 | Wheat | plasma membrane | 92.23 | 90.59 |
| HORVU6Hr1G080150.1 | Barley | plasma membrane | 88.86 | 86.62 |
| TraesCS6B01G360900.1 | Wheat | plasma membrane | 82.9 | 82.47 |
| TraesCS6B01G360500.1 | Wheat | extracellular, golgi, plasma membrane | 64.77 | 81.7 |
| TraesCS6B01G360800.1 | Wheat | extracellular, golgi, plasma membrane | 82.9 | 81.42 |
| TraesCS6B01G360400.1 | Wheat | plasma membrane | 81.35 | 80.93 |
| TraesCS6B01G360700.1 | Wheat | extracellular, golgi, plasma membrane | 75.91 | 80.05 |
| Zm00001d018195_P001 | Maize | plasma membrane | 75.39 | 73.86 |
| EES07591 | Sorghum | golgi, plasma membrane | 73.06 | 73.25 |
| Os02t0768300-01 | Rice | golgi, plasma membrane | 69.69 | 70.05 |
| TraesCS7B01G073900.1 | Wheat | plasma membrane | 63.47 | 62.66 |
| GSMUA_Achr7P13070_001 | Banana | golgi, plasma membrane, vacuole | 54.92 | 56.84 |
| TraesCS7B01G393200.1 | Wheat | plasma membrane | 53.37 | 56.44 |
| TraesCS1B01G321500.1 | Wheat | plasma membrane | 46.63 | 46.27 |
| TraesCS3B01G362000.1 | Wheat | golgi, plasma membrane, vacuole | 46.37 | 46.25 |
| TraesCS1B01G267300.1 | Wheat | plasma membrane | 45.85 | 43.81 |
| TraesCS3B01G026700.1 | Wheat | plasma membrane | 30.83 | 32.25 |
| TraesCS3B01G011600.1 | Wheat | plasma membrane | 31.61 | 31.2 |
| TraesCS3B01G006900.1 | Wheat | plasma membrane | 31.35 | 31.03 |
| TraesCS6B01G298700.1 | Wheat | plasma membrane | 26.17 | 25.57 |
| TraesCS7B01G309300.1 | Wheat | plasma membrane | 25.91 | 25.06 |
| TraesCS4B01G316400.2 | Wheat | plastid | 25.65 | 23.97 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G360600.1 | EnsemblPlantsGene:TraesCS6B01G360600 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom | InterPro:WAT1-related |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF21 | PFAM:PF00892 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| MapMan:24.2.1.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:632419937..632423368
Molecular Weight (calculated)
41407.7 Da
IEP (calculated)
9.905
GRAVY (calculated)
0.589
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMGWKVLSD VKPYLAMVLL QVGFAGMYII AVASLKAGMS HFVLVVYRNL VATAVMAPFA LYFERGRRPK MTTTIFLKIM GLTILEPVID QNLYFLGAKL
101: TSAGFATALL NTLPAVTFVL ALILRMEKVR LRSLHSQAKI AGTVLTVTGA VLMILYHGPA MHFPWTKGQH HATAGGQGAV GSAAAARDWL KGTMMLIGSC
201: MVWSCFFILQ SSTLRSYPAE LSVTALICGM GSLMSGAVAL VAERANTQAW VIGFDNRLLT VVYAGIVCSG VAYYLQGVVS RQRGPVFVTA FNPLCMIITA
301: VMGSIILKEE ITLGSVTGAV IIVVGLYFLI WGKIKDDISQ VSDVSVKVAS ELPLTSVTNG HGKQHEPGNG KGHHVLDVET RAEKHG
101: TSAGFATALL NTLPAVTFVL ALILRMEKVR LRSLHSQAKI AGTVLTVTGA VLMILYHGPA MHFPWTKGQH HATAGGQGAV GSAAAARDWL KGTMMLIGSC
201: MVWSCFFILQ SSTLRSYPAE LSVTALICGM GSLMSGAVAL VAERANTQAW VIGFDNRLLT VVYAGIVCSG VAYYLQGVVS RQRGPVFVTA FNPLCMIITA
301: VMGSIILKEE ITLGSVTGAV IIVVGLYFLI WGKIKDDISQ VSDVSVKVAS ELPLTSVTNG HGKQHEPGNG KGHHVLDVET RAEKHG
001: MKGGSMEKIK PILAIISLQF GYAGMYIITM VSFKHGMDHW VLATYRHVVA TVVMAPFALM FERKIRPKMT LAIFWRLLAL GILEPLMDQN LYYIGLKNTS
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
Arabidopsis Description
WAT1-related protein At1g44800 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.