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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 6
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d018195_P001 Maize plasma membrane 91.43 89.34
Os02t0768300-01 Rice golgi, plasma membrane 80.26 80.47
TraesCS6A01G330100.1 Wheat plasma membrane 77.66 77.06
TraesCS6B01G360900.1 Wheat plasma membrane 77.66 77.06
TraesCS6B01G360400.1 Wheat plasma membrane 77.66 77.06
TraesCS6D01G309000.1 Wheat extracellular, golgi, plasma membrane 74.55 76.94
TraesCS6A01G330000.1 Wheat extracellular, golgi, plastid, vacuole 31.95 76.88
TraesCS6D01G308500.1 Wheat plasma membrane 77.14 76.74
TraesCS6A01G329600.1 Wheat plasma membrane 76.88 76.49
TraesCS6A01G329900.1 Wheat plasma membrane 75.58 75.58
HORVU6Hr1G080260.1 Barley plasma membrane 75.58 75.58
TraesCS6B01G360700.1 Wheat extracellular, golgi, plasma membrane 71.17 74.86
TraesCS6B01G360800.1 Wheat extracellular, golgi, plasma membrane 75.84 74.3
HORVU6Hr1G080220.1 Barley golgi, plasma membrane 74.55 73.97
TraesCS6D01G308700.1 Wheat plasma membrane 73.51 73.89
TraesCS6A01G329800.1 Wheat plasma membrane 74.81 73.28
TraesCS6B01G360600.1 Wheat plasma membrane 73.25 73.06
HORVU6Hr1G080270.3 Barley plasma membrane 75.32 73.05
TraesCS6D01G308900.1 Wheat extracellular, golgi, plasma membrane 61.04 72.98
TraesCS6D01G308800.1 Wheat golgi 75.32 72.5
TraesCS6A01G329700.1 Wheat plasma membrane 71.43 71.43
TraesCS6D01G308600.1 Wheat plasma membrane 71.95 70.48
HORVU6Hr1G080150.1 Barley plasma membrane 72.47 70.45
TraesCS6B01G360500.1 Wheat extracellular, golgi, plasma membrane 55.58 69.93
EER88045 Sorghum golgi, plasma membrane, plastid 68.57 66.84
GSMUA_Achr7P13070_001 Banana golgi, plasma membrane, vacuole 60.0 61.93
OQU91876 Sorghum golgi, plasma membrane 54.03 56.52
EES19520 Sorghum peroxisome 47.53 45.86
OQU78229 Sorghum plasma membrane 46.49 45.32
EES03768 Sorghum plasma membrane 45.71 43.14
KXG40121 Sorghum golgi, plasma membrane, vacuole 31.69 37.31
EES06137 Sorghum plasma membrane 35.06 34.97
KXG19264 Sorghum plasma membrane 31.95 34.17
EER94681 Sorghum plasma membrane 33.77 33.77
EES02603 Sorghum plasma membrane 31.95 32.8
EES15167 Sorghum plasma membrane 34.03 32.67
EER92847 Sorghum plasma membrane 30.91 31.9
KXG30925 Sorghum plasma membrane 26.75 26.21
KXG30926 Sorghum plasma membrane 21.3 25.39
EER92186 Sorghum cytosol, golgi, peroxisome 24.94 24.62
KXG20824 Sorghum cytosol, golgi, peroxisome 26.23 23.88
EER92187 Sorghum golgi, mitochondrion, plasma membrane, plastid 23.64 23.7
Protein Annotations
MapMan:24.2.1.5EntrezGene:8078933UniProt:C5XSW8EnsemblPlants:EES07591ProteinID:EES07591ProteinID:EES07591.1
InterPro:EamA_domGO:GO:0003333GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0032973GO:GO:0043090GO:GO:0080144PFAM:PF00892PANTHER:PTHR31218
PANTHER:PTHR31218:SF21EnsemblPlantsGene:SORBI_3004G311000SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0001A86179InterPro:WAT1-related
RefSeq:XP_002454615.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr4:-:64749515..64752467
Molecular Weight (calculated)
41042.0 Da
IEP (calculated)
9.608
GRAVY (calculated)
0.628
Length
385 amino acids
Sequence
(BLAST)
001: MGVGKALNDV KPYLAMILLQ VGFAGMYIVA VASLKRGMSH FVLVVYRNLF ATAVMAPFAL WFERKSRPRM TIKIFLKIMG LTLLEPVLDQ NLYFMGANLT
101: SAGFASALIN ILPAVTFVMA LVLRMEKVRL RSVHSQAKIV GTVLTVAGAV LMILYHGPVV QFPWSKGHHH DAGAQGAASS GSFLTGIITI IVACVCWSAF
201: FVLQANTLKS YPAELSLTTL ICLMGSLMSG SVALVAERNN TQAWVIGFDT RLFTCAYAGI VCSGVAYYVQ GIVSRQRGPV FVTAFNPLCM IITAIMGSII
301: LKEEITRGSV IGAAIIVLGL YALIWGKSKD EVNQVADVSA SGGCGSKGGE LPITLAQPNG NGKHELGSGR GVVFDVETPA ANGHY
Best Arabidopsis Sequence Match ( AT1G21890.1 )
(BLAST)
001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI
Arabidopsis Description
WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.