Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- golgi 4
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G329900.1 | Wheat | plasma membrane | 93.25 | 96.88 |
| TraesCS6B01G360700.1 | Wheat | extracellular, golgi, plasma membrane | 88.5 | 96.72 |
| HORVU6Hr1G080260.1 | Barley | plasma membrane | 89.0 | 92.47 |
| TraesCS6D01G308500.1 | Wheat | plasma membrane | 83.5 | 86.3 |
| TraesCS6D01G309000.1 | Wheat | extracellular, golgi, plasma membrane | 77.0 | 82.57 |
| TraesCS6D01G308700.1 | Wheat | plasma membrane | 78.25 | 81.72 |
| TraesCS6D01G308900.1 | Wheat | extracellular, golgi, plasma membrane | 64.0 | 79.5 |
| TraesCS6D01G308600.1 | Wheat | plasma membrane | 77.75 | 79.13 |
| Os02t0768300-01 | Rice | golgi, plasma membrane | 73.0 | 76.04 |
| Zm00001d018195_P001 | Maize | plasma membrane | 74.25 | 75.38 |
| EES07591 | Sorghum | golgi, plasma membrane | 72.5 | 75.32 |
| TraesCS7D01G170200.1 | Wheat | golgi | 62.75 | 63.87 |
| GSMUA_Achr7P13070_001 | Banana | golgi, plasma membrane, vacuole | 54.0 | 57.91 |
| TraesCS7D01G476400.1 | Wheat | plasma membrane | 51.75 | 56.71 |
| TraesCS3D01G325400.1 | Wheat | golgi, plasma membrane, vacuole | 46.0 | 47.55 |
| TraesCS1D01G309800.1 | Wheat | plasma membrane | 44.25 | 45.5 |
| TraesCS1D01G256100.1 | Wheat | golgi, peroxisome, plasma membrane | 43.5 | 42.86 |
| TraesCS4D01G313000.1 | Wheat | mitochondrion, plasma membrane | 33.25 | 34.73 |
| TraesCS3D01G003600.1 | Wheat | golgi, plasma membrane, vacuole | 31.5 | 32.47 |
| TraesCS3D01G027300.1 | Wheat | plasma membrane | 29.25 | 31.37 |
| TraesCS7D01G280200.1 | Wheat | plasma membrane | 26.0 | 30.23 |
| TraesCS7D01G403100.2 | Wheat | plasma membrane | 25.25 | 25.31 |
| TraesCS6D01G251700.1 | Wheat | plasma membrane | 24.5 | 24.81 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G308800.1 | EnsemblPlantsGene:TraesCS6D01G308800 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom | InterPro:WAT1-related |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF21 | PFAM:PF00892 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| MapMan:24.2.1.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:419614268..419616080
Molecular Weight (calculated)
41705.8 Da
IEP (calculated)
9.566
GRAVY (calculated)
0.712
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMGWKAVND AKPYLAMVLL QVGFAGMYII AVASLKRGMS HFVLVVYRNL VATAVMAPFA LYFERGVRPK MTITIFIKIM GLALLEPVLD QNLYYMGANL
101: TSAGFATALV NILPAVTFVL ALILRMEKVR LRSLHSQAKI AGTVLTVAGA VLMVLYHGPV VQFPWTKGQH HAGGAATAAD GAAWLKGTIM TVAACVAWSC
201: FFILQSSTLR DYPAELSLTV LICGVGSVMS TAVAVVAERA NTHAWVIGFD TRLFTVVYGG IVCSGVAYYV QGVVSRQRGP VFVTAFNPLC MIVTAVMGSI
301: ILKEAITLGS VIGAVIIVVG LYFLIWGKSK DGISQVSDVS VKGAGELPLT TATNGHGSSS GKHVLGNGNG DVHVLDVETP TTNGHXXXXX XSIFFLSAFP
101: TSAGFATALV NILPAVTFVL ALILRMEKVR LRSLHSQAKI AGTVLTVAGA VLMVLYHGPV VQFPWTKGQH HAGGAATAAD GAAWLKGTIM TVAACVAWSC
201: FFILQSSTLR DYPAELSLTV LICGVGSVMS TAVAVVAERA NTHAWVIGFD TRLFTVVYGG IVCSGVAYYV QGVVSRQRGP VFVTAFNPLC MIVTAVMGSI
301: ILKEAITLGS VIGAVIIVVG LYFLIWGKSK DGISQVSDVS VKGAGELPLT TATNGHGSSS GKHVLGNGNG DVHVLDVETP TTNGHXXXXX XSIFFLSAFP
001: MEEVKKRDCM EKARPFISMV VLQVGLAGMD ILSKAVLNKG MSNYVLVVYR HAVATIVMAP FAFYFDKKVR PKMTLMIFFK ISLLGLLEPV IDQNLYYLGM
101: KYTTATFATA MYNVLPAITF VLAYIFGLER VKLRCIRSTG KVVGTLATVG GAMIMTLVKG PVLDLFWTKG VSAHNTAGTD IHSAIKGAVL VTIGCFSYAC
201: FMILQAITLR TYPAELSLTA WICLMGTIEG TAVALVMEKG NPSAWAIGWD TKLLTATYSG IVCSALAYYV GGVVMKTRGP VFVTAFSPLC MIIVAIMSTI
301: IFAEQMYLGR VLGAVVICAG LYLVIWGKGK DYKYNSTLQL DDESAQPKLE LSGNGKDNVD HEVITISKQG EQRRTAVETV
101: KYTTATFATA MYNVLPAITF VLAYIFGLER VKLRCIRSTG KVVGTLATVG GAMIMTLVKG PVLDLFWTKG VSAHNTAGTD IHSAIKGAVL VTIGCFSYAC
201: FMILQAITLR TYPAELSLTA WICLMGTIEG TAVALVMEKG NPSAWAIGWD TKLLTATYSG IVCSALAYYV GGVVMKTRGP VFVTAFSPLC MIIVAIMSTI
301: IFAEQMYLGR VLGAVVICAG LYLVIWGKGK DYKYNSTLQL DDESAQPKLE LSGNGKDNVD HEVITISKQG EQRRTAVETV
Arabidopsis Description
WAT1-related protein At2g37460 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUS1]
SUBAcon: [plasma membrane,vacuole,cytosol]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.