Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G360400.1 | Wheat | plasma membrane | 97.16 | 96.91 |
| TraesCS6A01G329600.1 | Wheat | plasma membrane | 96.64 | 96.64 |
| TraesCS6D01G308800.1 | Wheat | golgi | 86.3 | 83.5 |
| TraesCS6D01G309000.1 | Wheat | extracellular, golgi, plasma membrane | 80.36 | 83.38 |
| TraesCS6D01G308700.1 | Wheat | plasma membrane | 80.36 | 81.2 |
| TraesCS6D01G308900.1 | Wheat | extracellular, golgi, plasma membrane | 65.89 | 79.19 |
| TraesCS6D01G308600.1 | Wheat | plasma membrane | 79.07 | 77.86 |
| Zm00001d018195_P001 | Maize | plasma membrane | 78.55 | 77.16 |
| EES07591 | Sorghum | golgi, plasma membrane | 76.74 | 77.14 |
| Os02t0768300-01 | Rice | golgi, plasma membrane | 73.64 | 74.22 |
| TraesCS7D01G170200.1 | Wheat | golgi | 66.67 | 65.65 |
| GSMUA_Achr7P13070_001 | Banana | golgi, plasma membrane, vacuole | 56.33 | 58.45 |
| TraesCS7D01G476400.1 | Wheat | plasma membrane | 53.75 | 56.99 |
| TraesCS3D01G325400.1 | Wheat | golgi, plasma membrane, vacuole | 46.25 | 46.25 |
| TraesCS1D01G309800.1 | Wheat | plasma membrane | 45.99 | 45.76 |
| TraesCS1D01G256100.1 | Wheat | golgi, peroxisome, plasma membrane | 45.99 | 43.84 |
| TraesCS4D01G313000.1 | Wheat | mitochondrion, plasma membrane | 33.85 | 34.2 |
| TraesCS3D01G003600.1 | Wheat | golgi, plasma membrane, vacuole | 31.78 | 31.7 |
| TraesCS3D01G027300.1 | Wheat | plasma membrane | 30.49 | 31.64 |
| TraesCS7D01G280200.1 | Wheat | plasma membrane | 26.36 | 29.65 |
| TraesCS7D01G403100.2 | Wheat | plasma membrane | 25.84 | 25.06 |
| TraesCS6D01G251700.1 | Wheat | plasma membrane | 25.06 | 24.56 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G308500.1 | EnsemblPlantsGene:TraesCS6D01G308500 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom | InterPro:WAT1-related |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF21 | PFAM:PF00892 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| MapMan:24.2.1.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:419284221..419287589
Molecular Weight (calculated)
41116.1 Da
IEP (calculated)
9.828
GRAVY (calculated)
0.672
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMGWKVVSD VKPYLAMVLL QVGFAGMYIV AVASLKRGMS HFVLVVYRNL VATAVMAPFA LYFERGLRPK MTITIFIKIM GLAFLEPVLD QNLYYMGAKL
101: TSAGFAAALI NILPAVTFVL ALILRMEKVR LRSLHSQAKI AGTVLTVAGA VLMILYHGPA VQFPWTKGQH HASGAAAGAD AAAWLKGTIM VIAACVAWSC
201: FFVLQSSTLR DYPSELSLTV LICGVGSVMS TGVALVAKRA NTQAWVIGFD ARLFTAVYAG IVCSGVAYYV QGIVSKQRGP VFVTAFNPLC MIITAVMGSI
301: ILKEEITLGS VIGAVIIVVG LYFLIWGKSK DNVNQVSDDF VAGSSKGAGE LPLTSVTNGN GKQHELGNGK FNGGYVLNVE TPASNGN
101: TSAGFAAALI NILPAVTFVL ALILRMEKVR LRSLHSQAKI AGTVLTVAGA VLMILYHGPA VQFPWTKGQH HASGAAAGAD AAAWLKGTIM VIAACVAWSC
201: FFVLQSSTLR DYPSELSLTV LICGVGSVMS TGVALVAKRA NTQAWVIGFD ARLFTAVYAG IVCSGVAYYV QGIVSKQRGP VFVTAFNPLC MIITAVMGSI
301: ILKEEITLGS VIGAVIIVVG LYFLIWGKSK DNVNQVSDDF VAGSSKGAGE LPLTSVTNGN GKQHELGNGK FNGGYVLNVE TPASNGN
001: MKGGSMEKIK PILAIISLQF GYAGMYIITM VSFKHGMDHW VLATYRHVVA TVVMAPFALM FERKIRPKMT LAIFWRLLAL GILEPLMDQN LYYIGLKNTS
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST
Arabidopsis Description
WAT1-related protein At1g44800 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.