Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G362000.1 | Wheat | golgi, plasma membrane, vacuole | 97.93 | 97.93 |
| TraesCS3A01G331900.1 | Wheat | golgi, plasma membrane, vacuole | 96.12 | 97.38 |
| Os01t0803300-01 | Rice | golgi, plasma membrane | 68.99 | 80.66 |
| EES03768 | Sorghum | plasma membrane | 84.75 | 80.39 |
| Zm00001d043171_P001 | Maize | plasma membrane | 83.72 | 78.45 |
| TraesCS1D01G309800.1 | Wheat | plasma membrane | 75.97 | 75.58 |
| GSMUA_Achr4P00260_001 | Banana | plasma membrane | 68.99 | 69.9 |
| HORVU3Hr1G078710.1 | Barley | golgi, plasma membrane | 66.67 | 68.44 |
| HORVU5Hr1G044210.1 | Barley | golgi | 64.6 | 66.14 |
| TraesCS1D01G256100.1 | Wheat | golgi, peroxisome, plasma membrane | 67.7 | 64.53 |
| Solyc10g078270.1.1 | Tomato | golgi, plasma membrane, plastid | 62.79 | 63.45 |
| PGSC0003DMT400018488 | Potato | golgi, plasma membrane, plastid | 62.27 | 63.09 |
| VIT_13s0084g00090.t01 | Wine grape | golgi, plasma membrane, plastid | 64.86 | 62.28 |
| KRH62737 | Soybean | plasma membrane | 62.53 | 60.8 |
| GSMUA_Achr7P21250_001 | Banana | plastid | 51.68 | 60.79 |
| KRH56218 | Soybean | plasma membrane | 62.02 | 60.61 |
| Solyc10g080990.1.1 | Tomato | golgi, plasma membrane, plastid | 58.66 | 57.76 |
| KRH20615 | Soybean | plasma membrane | 60.98 | 57.7 |
| PGSC0003DMT400072217 | Potato | plasma membrane | 57.36 | 57.66 |
| KRH13279 | Soybean | plasma membrane | 60.72 | 57.46 |
| AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 58.91 | 56.72 |
| CDX99012 | Canola | plasma membrane | 32.82 | 56.7 |
| CDX70003 | Canola | plasma membrane | 58.4 | 56.64 |
| Solyc10g080980.1.1 | Tomato | golgi, plasma membrane, vacuole | 55.81 | 56.4 |
| Bra009296.1-P | Field mustard | plasma membrane | 57.88 | 56.14 |
| CDX99013 | Canola | golgi, plasma membrane, vacuole | 20.41 | 50.64 |
| TraesCS6D01G309000.1 | Wheat | extracellular, golgi, plasma membrane | 46.25 | 47.99 |
| TraesCS7D01G476400.1 | Wheat | plasma membrane | 44.19 | 46.85 |
| TraesCS6D01G308700.1 | Wheat | plasma membrane | 45.99 | 46.48 |
| TraesCS6D01G308500.1 | Wheat | plasma membrane | 46.25 | 46.25 |
| TraesCS6D01G308600.1 | Wheat | plasma membrane | 46.77 | 46.06 |
| TraesCS6D01G308800.1 | Wheat | golgi | 47.55 | 46.0 |
| TraesCS6D01G308900.1 | Wheat | extracellular, golgi, plasma membrane | 37.73 | 45.34 |
| TraesCS7D01G170200.1 | Wheat | golgi | 43.15 | 42.49 |
| TraesCS3D01G027300.1 | Wheat | plasma membrane | 34.63 | 35.92 |
| TraesCS3D01G003600.1 | Wheat | golgi, plasma membrane, vacuole | 35.92 | 35.82 |
| TraesCS4D01G313000.1 | Wheat | mitochondrion, plasma membrane | 34.11 | 34.46 |
| TraesCS7D01G280200.1 | Wheat | plasma membrane | 29.46 | 33.14 |
| TraesCS6D01G251700.1 | Wheat | plasma membrane | 27.13 | 26.58 |
| TraesCS7D01G403100.2 | Wheat | plasma membrane | 26.36 | 25.56 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G325400.1 | EnsemblPlantsGene:TraesCS3D01G325400 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom | InterPro:WAT1-related |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF140 | PFAM:PF00892 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| MapMan:24.2.1.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:438264491..438266230
Molecular Weight (calculated)
41602.6 Da
IEP (calculated)
9.320
GRAVY (calculated)
0.565
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGYGDLFEK AKPYIAMICL QFGYAGMNVI TKVSLNGGMS HYVLVVYRHA FATVSIAPFA LILERKVRPK MTWSSFLQIF VLALLGPVID QNFYYVGLKY
101: TGPTFACAMS NILPAMTFVM AFIFRMEKVD LRNLRCQAKV AGTVVTVAGA MLMTLYKGPL MRMAWTSHGQ AHGGEAPAVD PTGREWFLGS LFIIIATLAW
201: ASLFILQAHT LKQYSAPLSL TTLICFVGTL QAIVVTLAME HRPSVWTIGF DMNLLAAAYA GIVTSSIAYY VQGLVIQKTG PVFASAFSPL MMIVVAVMGS
301: FILSEKIYLG GVLGSVLIVI GLYSVLWGKH KETQAESAAL REALPMAMAS YTSKVTGDAA SAGHDPECEK ANGAAKPSSN GHGASAV
101: TGPTFACAMS NILPAMTFVM AFIFRMEKVD LRNLRCQAKV AGTVVTVAGA MLMTLYKGPL MRMAWTSHGQ AHGGEAPAVD PTGREWFLGS LFIIIATLAW
201: ASLFILQAHT LKQYSAPLSL TTLICFVGTL QAIVVTLAME HRPSVWTIGF DMNLLAAAYA GIVTSSIAYY VQGLVIQKTG PVFASAFSPL MMIVVAVMGS
301: FILSEKIYLG GVLGSVLIVI GLYSVLWGKH KETQAESAAL REALPMAMAS YTSKVTGDAA SAGHDPECEK ANGAAKPSSN GHGASAV
001: MGLRMSESAK PYFAMVCLQF GYAGMNLVTK TVLDRGMSHY VLVAYRNAFA TAAIAPFALL SERKVRSKMT FPIFMRIFLL ALLGPVIDQN LYYIGLKLTS
101: PTFSSAVSNI VPAITIILAT LFRMEKVEMR KVRCLVKVMG TLVTVVGSIL MIFYKGPFIN FFRSHLTAAS SPPTADYLKA AVFLLLASLS WASFFVLQAA
201: TLKKYSAHLS MSTMVCFMGT LQSLALAFVM EHNPSALNIG FDMNLLASAY AGIMSSSIAY YVQGLMMQRK GPVFVTAFNP LIVVIVSIMS FFVLGQGIYL
301: GGVIGVVVLM VGVYAVLWGK HVDDDGEETR HEDNVVAVKC CSGNNGLTIM PKIDEADEED VETGKATSEK ESSVPEVVVV VFCSENVHSV SRPN
101: PTFSSAVSNI VPAITIILAT LFRMEKVEMR KVRCLVKVMG TLVTVVGSIL MIFYKGPFIN FFRSHLTAAS SPPTADYLKA AVFLLLASLS WASFFVLQAA
201: TLKKYSAHLS MSTMVCFMGT LQSLALAFVM EHNPSALNIG FDMNLLASAY AGIMSSSIAY YVQGLMMQRK GPVFVTAFNP LIVVIVSIMS FFVLGQGIYL
301: GGVIGVVVLM VGVYAVLWGK HVDDDGEETR HEDNVVAVKC CSGNNGLTIM PKIDEADEED VETGKATSEK ESSVPEVVVV VFCSENVHSV SRPN
Arabidopsis Description
WAT1-related protein At2g40900 [Source:UniProtKB/Swiss-Prot;Acc:F4IJ08]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.