Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G325400.1 | Wheat | golgi, plasma membrane, vacuole | 97.38 | 96.12 |
| TraesCS3B01G362000.1 | Wheat | golgi, plasma membrane, vacuole | 97.38 | 96.12 |
| Os01t0803300-01 | Rice | golgi, plasma membrane | 70.42 | 81.27 |
| EES03768 | Sorghum | plasma membrane | 85.34 | 79.9 |
| Zm00001d043171_P001 | Maize | plasma membrane | 84.82 | 78.45 |
| TraesCS1A01G310300.1 | Wheat | plasma membrane | 76.18 | 74.81 |
| GSMUA_Achr4P00260_001 | Banana | plasma membrane | 69.63 | 69.63 |
| HORVU3Hr1G078710.1 | Barley | golgi, plasma membrane | 67.8 | 68.7 |
| HORVU5Hr1G044210.1 | Barley | golgi | 65.71 | 66.4 |
| TraesCS1A01G256700.1 | Wheat | peroxisome | 68.59 | 65.01 |
| Solyc10g078270.1.1 | Tomato | golgi, plasma membrane, plastid | 63.61 | 63.45 |
| PGSC0003DMT400018488 | Potato | golgi, plasma membrane, plastid | 63.09 | 63.09 |
| VIT_13s0084g00090.t01 | Wine grape | golgi, plasma membrane, plastid | 65.71 | 62.28 |
| GSMUA_Achr7P21250_001 | Banana | plastid | 52.88 | 61.4 |
| KRH56218 | Soybean | plasma membrane | 63.61 | 61.36 |
| KRH62737 | Soybean | plasma membrane | 63.61 | 61.06 |
| KRH20615 | Soybean | plasma membrane | 62.3 | 58.19 |
| Solyc10g080990.1.1 | Tomato | golgi, plasma membrane, plastid | 59.69 | 58.02 |
| KRH13279 | Soybean | plasma membrane | 62.04 | 57.95 |
| PGSC0003DMT400072217 | Potato | plasma membrane | 58.38 | 57.92 |
| CDX99012 | Canola | plasma membrane | 33.51 | 57.14 |
| AT5G07050.1 | Thale cress | golgi, plasma membrane, vacuole | 59.95 | 56.97 |
| Solyc10g080980.1.1 | Tomato | golgi, plasma membrane, vacuole | 56.81 | 56.66 |
| CDX70003 | Canola | plasma membrane | 59.16 | 56.64 |
| Bra009296.1-P | Field mustard | plasma membrane | 58.64 | 56.14 |
| CDX99013 | Canola | golgi, plasma membrane, vacuole | 20.42 | 50.0 |
| TraesCS6A01G330100.1 | Wheat | plasma membrane | 48.43 | 47.68 |
| TraesCS6A01G329900.1 | Wheat | plasma membrane | 47.12 | 46.75 |
| TraesCS6A01G329700.1 | Wheat | plasma membrane | 46.6 | 46.23 |
| TraesCS6A01G329600.1 | Wheat | plasma membrane | 45.81 | 45.22 |
| TraesCS6A01G329800.1 | Wheat | plasma membrane | 46.07 | 44.78 |
| TraesCS7A01G490000.1 | Wheat | plasma membrane | 44.76 | 44.65 |
| TraesCS7A01G169100.1 | Wheat | plasma membrane | 43.19 | 42.53 |
| TraesCS6A01G330000.1 | Wheat | extracellular, golgi, plastid, vacuole | 15.71 | 37.5 |
| TraesCS3A01G019600.1 | Wheat | plasma membrane | 34.82 | 36.04 |
| TraesCS4A01G415600.1 | Wheat | plasma membrane | 35.08 | 35.92 |
| TraesCS3A01G007100.1 | Wheat | golgi, plasma membrane, vacuole | 35.86 | 35.77 |
| TraesCS7A01G281700.1 | Wheat | plasma membrane | 25.92 | 31.83 |
| TraesCS7A01G409900.1 | Wheat | plasma membrane | 25.92 | 24.81 |
| TraesCS6A01G271500.1 | Wheat | plasma membrane | 26.96 | 23.62 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G331900.1 | EnsemblPlantsGene:TraesCS3A01G331900 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom | InterPro:WAT1-related |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF140 | PFAM:PF00892 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| MapMan:24.2.1.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:576604021..576605783
Molecular Weight (calculated)
41192.0 Da
IEP (calculated)
9.336
GRAVY (calculated)
0.529
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGYGDLFEK AKPYIAMICL QFGYAGMNVI TKVSLNGGMS HYVLVVYRHA FATVSIAPFA LIFERKVRPK MTWSSFLQIF VLALLGPVID QNFYYVGLKY
101: TGPTFACAMS NILPAMTFVM AFIFRMEKVD LRKVRCQAKV AGTVVTVAGA MLMTLYKGPL MRMAWTSHGQ AHGGEAPAVD PTGREWFLGS LFIIIATLAW
201: ASLFILQAHT LKQYSAPLSL TTLICFVGTL QAIVVTLAME HRPSVWTIGF DMNLLAAAYA GIVTSSIAYY VQGLVIQKTG PVFASAFSPL MMIVVAVMGS
301: FILSEKIYLG GVLGSVLIVI GLYSVLWGKH KETQAESAAL REAMASINSK GDGDAVHGHD PECEKANGAP KPSSNGHGAS AV
101: TGPTFACAMS NILPAMTFVM AFIFRMEKVD LRKVRCQAKV AGTVVTVAGA MLMTLYKGPL MRMAWTSHGQ AHGGEAPAVD PTGREWFLGS LFIIIATLAW
201: ASLFILQAHT LKQYSAPLSL TTLICFVGTL QAIVVTLAME HRPSVWTIGF DMNLLAAAYA GIVTSSIAYY VQGLVIQKTG PVFASAFSPL MMIVVAVMGS
301: FILSEKIYLG GVLGSVLIVI GLYSVLWGKH KETQAESAAL REAMASINSK GDGDAVHGHD PECEKANGAP KPSSNGHGAS AV
001: MSMEEISSCE SFLTSSKPYF AMISLQFGYA GMNIITKISL NTGMSHYVLV VYRHAIATAV IAPFAFFFER KAQPKITFSI FMQLFILGLL GPVIDQNFYY
101: MGLKYTSPTF SCAMSNMLPA MTFILAVLFR MEMLDLKKLW CQAKIAGTVV TVAGAMLMTI YKGPIVELFW TKYMHIQDSS HANTTSSKNS SSDKEFLKGS
201: ILLIFATLAW ASLFVLQAKI LKTYAKHQLS LTTLICFIGT LQAVAVTFVM EHNPSAWRIG WDMNLLAAAY SGIVASSISY YVQGIVMKKR GPVFATAFSP
301: LMMVIVAVMG SFVLAEKIFL GGVIGAVLIV IGLYAVLWGK QKENQVTICE LAKIDSNSKV TEDVEANGSK MKISEGDNSM LSTIVISVPL SETHLKKTIQ
401: EP
101: MGLKYTSPTF SCAMSNMLPA MTFILAVLFR MEMLDLKKLW CQAKIAGTVV TVAGAMLMTI YKGPIVELFW TKYMHIQDSS HANTTSSKNS SSDKEFLKGS
201: ILLIFATLAW ASLFVLQAKI LKTYAKHQLS LTTLICFIGT LQAVAVTFVM EHNPSAWRIG WDMNLLAAAY SGIVASSISY YVQGIVMKKR GPVFATAFSP
301: LMMVIVAVMG SFVLAEKIFL GGVIGAVLIV IGLYAVLWGK QKENQVTICE LAKIDSNSKV TEDVEANGSK MKISEGDNSM LSTIVISVPL SETHLKKTIQ
401: EP
Arabidopsis Description
WAT1-related protein At5g07050 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL41]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.