Factsheet for TraesCS6A01G330000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, extracellular, vacuole

Predictor Summary:

plastid 2
golgi 2
extracellular 2
endoplasmic reticulum 1
vacuole 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plastid, vacuole
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G308900.1	Wheat	extracellular, golgi, plasma membrane	98.12	48.76
TraesCS6B01G360800.1	Wheat	extracellular, golgi, plasma membrane	96.25	39.19
HORVU6Hr1G080270.3	Barley	plasma membrane	93.12	37.53
TraesCS6A01G330100.1	Wheat	plasma membrane	86.88	35.82
TraesCS6A01G329900.1	Wheat	plasma membrane	83.75	34.81
TraesCS6A01G329800.1	Wheat	plasma membrane	85.0	34.61
TraesCS6A01G329700.1	Wheat	plasma membrane	83.12	34.55
TraesCS6A01G329600.1	Wheat	plasma membrane	81.88	33.85
EES07591	Sorghum	golgi, plasma membrane	76.88	31.95
Zm00001d018195_P001	Maize	plasma membrane	78.12	31.73
Os02t0768300-01	Rice	golgi, plasma membrane	72.5	30.21
TraesCS7A01G169100.1	Wheat	plasma membrane	60.62	25.0
GSMUA_Achr7P13070_001	Banana	golgi, plasma membrane, vacuole	51.25	21.98
TraesCS7A01G490000.1	Wheat	plasma membrane	51.25	21.41
TraesCS7A01G281700.1	Wheat	plasma membrane	31.88	16.4
TraesCS1A01G256700.1	Wheat	peroxisome	40.62	16.13
TraesCS1A01G310300.1	Wheat	plasma membrane	38.75	15.94
TraesCS3A01G331900.1	Wheat	golgi, plasma membrane, vacuole	37.5	15.71
TraesCS3A01G007100.1	Wheat	golgi, plasma membrane, vacuole	29.38	12.27
TraesCS3A01G019600.1	Wheat	plasma membrane	28.12	12.2
TraesCS4A01G415600.1	Wheat	plasma membrane	25.62	10.99
TraesCS6A01G271500.1	Wheat	plasma membrane	18.75	6.88
TraesCS7A01G409900.1	Wheat	plasma membrane	16.88	6.77

Protein Annotations

EnsemblPlants:TraesCS6A01G330000.1	EnsemblPlantsGene:TraesCS6A01G330000	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	InterPro:EamA_dom	InterPro:WAT1-related
PANTHER:PTHR31218	PANTHER:PTHR31218:SF21	PFAM:PF00892	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix
MapMan:24.2.1.5	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:562869803..562870382

Molecular Weight (calculated)

16880.4 Da

IEP (calculated)

6.671

GRAVY (calculated)

0.333

Length

160 amino acids

Sequence
(BLAST)

001: MGSLMSGAIA LVAERANTQA WVIGFDTRLF TAVYAGIVCS GVAYYVQGIV SRQRGPVFVT AFNPLCMIVT AVMGSIILKE EINLGSVIGA AIIVGGLYFL
101: IWGKSKDEIN KVSDVSVKGA GELPLTSVTN DHGHGKQHEL GNSNGSHVLD VETPTTNGHY

Best Arabidopsis Sequence Match ( AT1G44800.1 )
(BLAST)

001: MKGGSMEKIK PILAIISLQF GYAGMYIITM VSFKHGMDHW VLATYRHVVA TVVMAPFALM FERKIRPKMT LAIFWRLLAL GILEPLMDQN LYYIGLKNTS
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST

Arabidopsis Description

WAT1-related protein At1g44800 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.