Factsheet for TraesCS6B01G360400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G308500.1	Wheat	plasma membrane	96.91	97.16
TraesCS6A01G329600.1	Wheat	plasma membrane	96.13	96.38
TraesCS6B01G360700.1	Wheat	extracellular, golgi, plasma membrane	81.96	86.89
TraesCS6B01G360900.1	Wheat	plasma membrane	84.54	84.54
TraesCS6B01G360800.1	Wheat	extracellular, golgi, plasma membrane	82.99	81.93
TraesCS6B01G360600.1	Wheat	plasma membrane	80.93	81.35
EES07591	Sorghum	golgi, plasma membrane	77.06	77.66
Zm00001d018195_P001	Maize	plasma membrane	78.61	77.41
TraesCS6B01G360500.1	Wheat	extracellular, golgi, plasma membrane	59.54	75.49
Os02t0768300-01	Rice	golgi, plasma membrane	73.97	74.74
TraesCS7B01G073900.1	Wheat	plasma membrane	66.24	65.73
GSMUA_Achr7P13070_001	Banana	golgi, plasma membrane, vacuole	56.19	58.45
TraesCS7B01G393200.1	Wheat	plasma membrane	53.35	56.71
TraesCS1B01G321500.1	Wheat	plasma membrane	46.91	46.79
TraesCS3B01G362000.1	Wheat	golgi, plasma membrane, vacuole	46.39	46.51
TraesCS1B01G267300.1	Wheat	plasma membrane	46.39	44.55
TraesCS3B01G026700.1	Wheat	plasma membrane	30.67	32.25
TraesCS3B01G011600.1	Wheat	plasma membrane	32.47	32.23
TraesCS3B01G006900.1	Wheat	plasma membrane	32.22	32.05
TraesCS7B01G309300.1	Wheat	plasma membrane	25.77	25.06
TraesCS4B01G316400.2	Wheat	plastid	26.55	24.94
TraesCS6B01G298700.1	Wheat	plasma membrane	25.0	24.56

Protein Annotations

EnsemblPlants:TraesCS6B01G360400.1	EnsemblPlantsGene:TraesCS6B01G360400	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	InterPro:EamA_dom	InterPro:WAT1-related
PANTHER:PTHR31218	PANTHER:PTHR31218:SF21	PFAM:PF00892	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix
MapMan:24.2.1.5	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:632241125..632244396

Molecular Weight (calculated)

41353.3 Da

IEP (calculated)

9.493

GRAVY (calculated)

0.665

Length

388 amino acids

Sequence
(BLAST)

001: MGMGWKVLSD VKPYLAMVLL QVGFAGMYIV AVASLKRGMS HFVLVVYRNL VATAVMAPFA LYFERGLRPK MTITIFLKIM GLAFLEPVLD QNLYYMGAKL
101: TSAGFAAALI NILPAVTFVL ALILRMEKVR LRSLHSQAKI AGTVLTVAGA VLMILYHGPA VQFPWTNGQH HAGSAAAGAD AAAWLKGTIM VIAACVAWSC
201: FFVLQSSTLR DYPSELSLTV LICGVGSVMS TGVALVAERA NTQAWVIGFD ARLFTAVYAG IVCSGVAYYV QGIVSKQRGP VFVTAFNPLC MIITAVMGSI
301: ILKEEITLGS VIGAVIIVVG LYFLIWGKSK DKVNQVSDDF IAGSSKGAGE LPLTSVTNGN GKQHELGDGK FNGSYVLNVE TPATNGNY

Best Arabidopsis Sequence Match ( AT1G44800.1 )
(BLAST)

001: MKGGSMEKIK PILAIISLQF GYAGMYIITM VSFKHGMDHW VLATYRHVVA TVVMAPFALM FERKIRPKMT LAIFWRLLAL GILEPLMDQN LYYIGLKNTS
101: ASYTSAFTNA LPAVTFILAL IFRLETVNFR KVHSVAKVVG TVITVGGAMI MTLYKGPAIE IVKAAHNSFH GGSSSTPTGQ HWVLGTIAIM GSISTWAAFF
201: ILQSYTLKVY PAELSLVTLI CGIGTILNAI ASLIMVRDPS AWKIGMDSGT LAAVYSGVVC SGIAYYIQSI VIKQRGPVFT TSFSPMCMII TAFLGALVLA
301: EKIHLGSIIG AVFIVLGLYS VVWGKSKDEV NPLDEKIVAK SQELPITNVV KQTNGHDVSG APTNGVVTST

Arabidopsis Description

WAT1-related protein At1g44800 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.