Factsheet for TraesCS6B01G360500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

plastid 2
golgi 3
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G329700.1	Wheat	plasma membrane	91.83	72.99
TraesCS6D01G308600.1	Wheat	plasma membrane	93.46	72.77
HORVU6Hr1G080220.1	Barley	golgi, plasma membrane	88.89	70.1
TraesCS6B01G360600.1	Wheat	plasma membrane	81.7	64.77
TraesCS6B01G360700.1	Wheat	extracellular, golgi, plasma membrane	77.45	64.75
TraesCS6B01G360800.1	Wheat	extracellular, golgi, plasma membrane	81.37	63.36
TraesCS6B01G360900.1	Wheat	plasma membrane	79.74	62.89
TraesCS6B01G360400.1	Wheat	plasma membrane	75.49	59.54
Zm00001d018195_P001	Maize	plasma membrane	72.55	56.35
EES07591	Sorghum	golgi, plasma membrane	69.93	55.58
Os02t0768300-01	Rice	golgi, plasma membrane	66.99	53.39
TraesCS7B01G073900.1	Wheat	plasma membrane	60.13	47.06
GSMUA_Achr7P13070_001	Banana	golgi, plasma membrane, vacuole	52.29	42.9
TraesCS7B01G393200.1	Wheat	plasma membrane	50.33	42.19
TraesCS3B01G362000.1	Wheat	golgi, plasma membrane, vacuole	44.77	35.4
TraesCS1B01G321500.1	Wheat	plasma membrane	43.79	34.45
TraesCS1B01G267300.1	Wheat	plasma membrane	44.12	33.42
TraesCS3B01G011600.1	Wheat	plasma membrane	32.68	25.58
TraesCS3B01G006900.1	Wheat	plasma membrane	32.35	25.38
TraesCS3B01G026700.1	Wheat	plasma membrane	29.74	24.66
TraesCS6B01G298700.1	Wheat	plasma membrane	26.47	20.51
TraesCS7B01G309300.1	Wheat	plasma membrane	24.18	18.55
TraesCS4B01G316400.2	Wheat	plastid	24.51	18.16

Protein Annotations

EnsemblPlants:TraesCS6B01G360500.1	EnsemblPlantsGene:TraesCS6B01G360500	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	InterPro:EamA_dom	InterPro:WAT1-related
PANTHER:PTHR31218	PANTHER:PTHR31218:SF21	PFAM:PF00892	SUPFAM:SSF103481	TMHMM:TMhelix	MapMan:24.2.1.5

Description

No Description!

Coordinates

chr6B:+:632304665..632305774

Molecular Weight (calculated)

32541.0 Da

IEP (calculated)

8.013

GRAVY (calculated)

0.568

Length

306 amino acids

Sequence
(BLAST)

001: MWLAFLEPVL DQNVYFMGAK LTSAAFATAL LNTLPAVTFM LALILRMEKV RLRSLHSQAK IAGTVLTVAG AVLMVLYHGP AVRFPWTKAH HHATIGGQAA
101: AARDWLIGTI MLIASCMIWP GFFILQANTL GSYPAELSLT ALICGMGSLM SGAVALVAER ANTQVWVIGF DNRLFTVVYG GIVCSGVAYY LQGVVSRQRG
201: PVFVTAFSPL SMVITAVMGS IVLKEEITLG SVIGAVIIVT GLYFIIWGKS KDEISCPSQV SDVSVKGASE LPLTSVTSGH GHGKQYELDN GNGGHVDVET
301: PTTNGH

Best Arabidopsis Sequence Match ( AT1G21890.1 )
(BLAST)

001: MGRGLMNSLK PYLAMISMQF GYAGMYIITM VSLKHGMNHY VLAVYRHAIA TAVIAPFALF HERKIRPKMT FRIFLQIALL GFIEPVLDQN LYYVGMTYTS
101: ATFASATANV LPAITFVLAI IFRLESVNFK KVRSIAKVVG TVITVSGALL MTLYKGPIVD FIRFGGGGGG GSDGAGGSHG GAGAAAMDKH WIPGTLMLLG
201: RTFGWAGFFI LQSFTLKQYP AELSLTTLIC LMGTLEGTAV SLVTVRDLSA WKIGFDSNLF AAAYSGVICS GVAYYVQGVV MRERGPVFVA TFNPLCVVIT
301: AALGVVVLSE SIHLGSVIGT LFIIVGLYTV VWGKGKDKRM TDDDEDCKGL PIKSPVKPVD TGKGLAAELE MKSKEGQEAK ATTTTQVEI

Arabidopsis Description

WAT1-related protein At1g21890 [Source:UniProtKB/Swiss-Prot;Acc:F4HZQ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.