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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG30925 Sorghum plasma membrane 73.06 60.05
HORVU6Hr1G068730.1 Barley golgi, mitochondrion, plasma membrane 65.94 59.5
Os02t0703900-02 Rice cytosol, golgi, plasma membrane 71.21 58.08
TraesCS6D01G251700.1 Wheat plasma membrane 70.28 57.47
TraesCS6B01G298700.1 Wheat plasma membrane 69.97 57.22
TraesCS6A01G271500.1 Wheat plasma membrane 69.66 51.61
KRH07254 Soybean plasma membrane 56.04 46.77
KRH07780 Soybean golgi, plasma membrane, plastid 55.73 46.39
Bra038272.1-P Field mustard plasma membrane 52.63 45.58
CDX86054 Canola plasma membrane 54.18 45.57
CDX99139 Canola plasma membrane 53.87 45.31
AT3G45870.1 Thale cress plasma membrane 53.87 45.19
CDY23124 Canola plasma membrane 53.25 44.91
CDY13056 Canola plasma membrane 52.94 44.65
AT5G45370.2 Thale cress plasma membrane 52.63 44.62
VIT_02s0087g00880.t01 Wine grape plasma membrane 51.7 44.41
KRH28983 Soybean plasma membrane 53.25 44.1
CDY13057 Canola plasma membrane 52.32 44.01
CDY23125 Canola plasma membrane 52.32 44.01
Bra027604.1-P Field mustard plasma membrane 52.32 44.01
Bra027605.1-P Field mustard plasma membrane 51.39 43.34
CDY09279 Canola plasma membrane 53.25 43.22
KRH28984 Soybean plasma membrane 48.3 43.09
Solyc12g096160.1.1 Tomato plasma membrane 51.08 42.97
PGSC0003DMT400075315 Potato plasma membrane 51.08 42.97
Solyc08g075460.2.1 Tomato plasma membrane 50.77 42.6
AT4G19185.1 Thale cress plasma membrane 52.32 42.46
Solyc08g075470.2.1 Tomato plasma membrane 50.15 42.41
Bra020969.1-P Field mustard cytosol, golgi, plasma membrane 52.01 42.21
Solyc08g075450.2.1 Tomato plasma membrane 49.23 42.06
CDX76488 Canola plasma membrane 51.7 41.96
PGSC0003DMT400004947 Potato plasma membrane 49.54 41.88
Bra013380.1-P Field mustard cytosol, golgi, plasma membrane, plastid 52.63 41.16
KRH28985 Soybean plasma membrane 49.23 40.87
CDX78925 Canola plasma membrane 48.3 39.8
EER92187 Sorghum golgi, mitochondrion, plasma membrane, plastid 46.13 38.8
KXG20824 Sorghum cytosol, golgi, peroxisome 47.37 36.17
EER92186 Sorghum cytosol, golgi, peroxisome 43.65 36.15
CDX99393 Canola mitochondrion 51.7 33.53
EES06137 Sorghum plasma membrane 37.77 31.61
EES15167 Sorghum plasma membrane 36.53 29.43
EES02603 Sorghum plasma membrane 32.2 27.73
KXG19264 Sorghum plasma membrane 29.41 26.39
KXG40121 Sorghum golgi, plasma membrane, vacuole 22.91 22.63
EER92847 Sorghum plasma membrane 25.39 21.98
EER94681 Sorghum plasma membrane 26.01 21.82
EES07591 Sorghum golgi, plasma membrane 25.39 21.3
EES19520 Sorghum peroxisome 25.7 20.8
OQU91876 Sorghum golgi, plasma membrane 23.22 20.38
OQU78229 Sorghum plasma membrane 24.77 20.25
EES03768 Sorghum plasma membrane 25.08 19.85
EER88045 Sorghum golgi, plasma membrane, plastid 24.15 19.75
Protein Annotations
MapMan:24.2.1.5UniProt:A0A194YRX4InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlants:KXG30926ProteinID:KXG30926ProteinID:KXG30926.1PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF133
EnsemblPlantsGene:SORBI_3004G268800SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0007F1DDDEInterPro:WAT1-relatedSEG:seg
Description
hypothetical protein
Coordinates
chr4:+:61305954..61308251
Molecular Weight (calculated)
34382.2 Da
IEP (calculated)
9.858
GRAVY (calculated)
0.837
Length
323 amino acids
Sequence
(BLAST)
001: MAAGERNGEG RRAHAAMVGS QRINAGYHVV AKLALNVGVN RVVFCVLRDL LALAVLAPLA VFQHRGSHAK ALPPVTWRLL VSFFILGLTG IYANQLLFLL
101: GLSYTNPTYA AAIQSTETVS LVSIEGRTKI GGTVVCVLGI VLIVLYRGPA LFRSGELELG AMPASMSQSQ TEPSRLVGLK KLHIGVLCLT VSGLGFMIII
201: IVVMLFGAPI LVQYPLSLSL TAYSYFFGAI LMVISGTFAT NDKKDRSLTR SELATVVYAG VISSALNNCL LTWSNKLLGP AVVALYIALQ PVLSALLSML
301: LLESPIYLGS IIGGFLIISG LYL
Best Arabidopsis Sequence Match ( AT3G45870.1 )
(BLAST)
001: MESTVEREAW KAHVAMIGVQ LFNGGYHVIT KVALNVGVNQ LVFCVFRDLI ALSILAPLAY IRDKRTRPPL NRQFLLAFFF LGLTGIFGNQ LLFLIGLNYT
101: NPTYAAAIQP SIPVFTFILA LIMGTERLNL FKLEGQAKVG GTLICVAGAV LMVLFRGLAL FGETEAESLG HGESRHTETS GHFMSGFFNG LGRWNLGVLC
201: LIGNCTCMAA FLAIQAPVLK KYPANLSVTA YSYFFGTMFM VTSAFFMTNE STNWSLTRSE FFAVVYAGVI ASALNYGLLT WSNKILGPSL VALYNPLQPA
301: ASAFLSRIFL GSPIYLGSIL GGCAIIAGLY SVTWASYKEK KAAAAMAVIP ITSKEAEPLI YKDHKNKPIG HLFTKSPISS PKSDD
Arabidopsis Description
WAT1-related protein At3g45870 [Source:UniProtKB/Swiss-Prot;Acc:Q5PP32]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.