Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26664 | Soybean | nucleus | 80.86 | 60.85 |
| VIT_06s0080g00970.t01 | Wine grape | nucleus | 53.91 | 51.55 |
| KRH34662 | Soybean | cytosol | 12.4 | 50.55 |
| Solyc06g074170.2.1 | Tomato | nucleus | 51.48 | 46.7 |
| PGSC0003DMT400015077 | Potato | nucleus | 50.94 | 46.32 |
| PGSC0003DMT400050482 | Potato | nucleus | 49.06 | 42.33 |
| AT3G44290.1 | Thale cress | cytosol | 36.66 | 40.6 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 36.39 | 39.82 |
| Bra021471.1-P | Field mustard | cytosol, golgi, nucleus | 36.12 | 39.65 |
| Solyc11g068750.1.1 | Tomato | nucleus, plasma membrane | 47.98 | 39.38 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 35.85 | 39.35 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 36.12 | 39.07 |
| CDX70995 | Canola | cytosol | 35.04 | 38.92 |
| AT5G22290.1 | Thale cress | cytosol | 35.31 | 38.53 |
| CDX92368 | Canola | cytosol | 34.77 | 38.51 |
| Bra020182.1-P | Field mustard | cytosol | 35.58 | 38.48 |
| CDY09128 | Canola | cytosol | 35.58 | 38.48 |
| CDX88803 | Canola | cytosol | 34.23 | 37.69 |
| Bra002403.1-P | Field mustard | cytosol | 32.88 | 37.65 |
| Bra006619.1-P | Field mustard | cytosol | 33.96 | 37.39 |
| CDY34716 | Canola | nucleus | 28.3 | 35.71 |
| KRH09473 | Soybean | nucleus | 23.45 | 32.95 |
| KRH38928 | Soybean | nucleus | 23.45 | 32.83 |
| KRH04320 | Soybean | nucleus | 25.34 | 27.49 |
| KRH58218 | Soybean | nucleus | 25.07 | 26.96 |
| KRH13792 | Soybean | nucleus | 24.26 | 25.94 |
| KRH43662 | Soybean | nucleus | 24.26 | 25.86 |
| KRH43549 | Soybean | cytosol | 20.49 | 23.53 |
| KRH59567 | Soybean | cytosol, golgi, nucleus | 17.52 | 20.5 |
| KRH72602 | Soybean | nucleus | 29.38 | 18.51 |
| KRH16970 | Soybean | nucleus | 29.38 | 18.47 |
| KRH53649 | Soybean | nucleus | 29.11 | 18.06 |
| KRH64046 | Soybean | nucleus | 23.45 | 18.01 |
| KRH64275 | Soybean | nucleus | 29.11 | 17.91 |
| KRH34660 | Soybean | plastid | 22.1 | 17.63 |
| KRG92124 | Soybean | nucleus | 21.83 | 17.42 |
| KRH53893 | Soybean | nucleus | 22.91 | 16.9 |
| KRH35027 | Soybean | nucleus | 25.07 | 16.61 |
| KRG91745 | Soybean | nucleus | 24.53 | 16.58 |
| KRH17271 | Soybean | cytosol, nucleus, plasma membrane | 26.42 | 15.22 |
| KRH72917 | Soybean | cytosol, nucleus, plasma membrane | 25.88 | 14.93 |
| KRH30885 | Soybean | cytosol, nucleus, vacuole | 26.42 | 14.58 |
| KRG98003 | Soybean | cytosol, nucleus, plasma membrane | 26.42 | 14.45 |
| KRG92121 | Soybean | cytosol | 23.18 | 14.24 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EMBL:ACUP02008425 | EnsemblPlantsGene:GLYMA_13G314600 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:K7M2Z6 |
| EnsemblPlants:KRH22653 | ProteinID:KRH22653 | ProteinID:KRH22653.1 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF40 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI0002960986 |
Description
hypothetical protein
Coordinates
chr13:-:40993314..40996140
Molecular Weight (calculated)
41953.1 Da
IEP (calculated)
7.452
GRAVY (calculated)
-0.692
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEGVSREAQ MSIAASSMFP GFRFCPTDEE LISYYLRKKL EGHEESVQVI SEVELCKYEP WDLPAKSFIQ SDNEWFFFSP RGRKYPNGSQ SKRATECGYW
101: KATGKERNVK SGSNIIGTKR TLVFHLGRAP KGERTEWIMH EYCINDKSQE SLVICRLKRN TEFRLSDASN RASSSQRHPV NSHESGCAIS GGGIDQRDAC
201: EQDKEVGCSS KRDSSSYGSP SMEQIDSVSE SNQRPVNEAT FTESSGQPKE GYEEDCYAEI LKDDIIKLDE SSVLVESHTR PQDPTQMQPA PQGTAQRRIR
301: LRVGNSKHSR AVVRFPSTMH SSKNTFFART TNSLVVLAFF VFTLMVLYFL SLVRGQKQDK YCGEFSGVNH D
101: KATGKERNVK SGSNIIGTKR TLVFHLGRAP KGERTEWIMH EYCINDKSQE SLVICRLKRN TEFRLSDASN RASSSQRHPV NSHESGCAIS GGGIDQRDAC
201: EQDKEVGCSS KRDSSSYGSP SMEQIDSVSE SNQRPVNEAT FTESSGQPKE GYEEDCYAEI LKDDIIKLDE SSVLVESHTR PQDPTQMQPA PQGTAQRRIR
301: LRVGNSKHSR AVVRFPSTMH SSKNTFFART TNSLVVLAFF VFTLMVLYFL SLVRGQKQDK YCGEFSGVNH D
001: MSKEAEMSIA VSALFPGFRF SPTDVELISY YLRRKIDGDE NSVAVIAEVE IYKFEPWDLP EESKLKSENE WFYFCARGRK YPHGSQSRRA TQLGYWKATG
101: KERSVKSGNQ VVGTKRTLVF HIGRAPRGER TEWIMHEYCI HGAPQDALVV CRLRKNADFR ASSTQKMEDG VVQDDGYVGQ RGGLEKEDKS YYESEHQIPN
201: GDIAESSNVV EDQADTDDDC YAEILNDDII KLDEEALKAS QAFRPTNPTH QETISSESSS KRSKCGIKKE STETMNCYAL FRIKNVAGTD SSWRFPNPFK
301: IKKDDSQRLM KNVLATTVFL AILFSFFWTV LIARN
101: KERSVKSGNQ VVGTKRTLVF HIGRAPRGER TEWIMHEYCI HGAPQDALVV CRLRKNADFR ASSTQKMEDG VVQDDGYVGQ RGGLEKEDKS YYESEHQIPN
201: GDIAESSNVV EDQADTDDDC YAEILNDDII KLDEEALKAS QAFRPTNPTH QETISSESSS KRSKCGIKKE STETMNCYAL FRIKNVAGTD SSWRFPNPFK
301: IKKDDSQRLM KNVLATTVFL AILFSFFWTV LIARN
Arabidopsis Description
NTL8NAC domain-containing protein 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.