CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97393
KRH11076
KRH21197
KRH31520
KRH42923
KRH42926
KRH45251
KRH59035
KRH59036
KRH76090

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G17170.1	KRG97393	AT1G27300.1	21798944
AT5G17170.1	KRH31520	AT1G27300.1	21798944
AT5G17170.1	KRH76090	AT1G27300.1	21798944
AT5G17170.1	KRH11076	AT4G19030.1	21798944
AT5G17170.1	KRH21197	AT4G19030.1	21798944
AT5G17170.1	KRH42923	AT4G19030.1	21798944
AT5G17170.1	KRH42926	AT4G19030.1	21798944
AT5G17170.1	KRH45251	AT4G19030.1	21798944
AT5G17170.1	KRH59035	AT4G19030.1	21798944
AT5G17170.1	KRH59036	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77719	Soybean	nucleus, plastid	57.61	38.69
GSMUA_Achr3P00390_001	Banana	plastid	39.13	37.5
Bra008575.1-P	Field mustard	cytosol	34.78	33.68
CDX69400	Canola	cytosol	34.78	33.68
VIT_16s0039g02540.t01	Wine grape	plastid	47.28	32.46
TraesCS7A01G294700.1	Wheat	plastid	45.11	32.05
TraesCS7D01G293100.1	Wheat	plastid	44.57	31.66
TraesCS7B01G189500.2	Wheat	plastid	44.57	31.66
Os08t0162600-01	Rice	plastid	44.57	31.54
CDX85473	Canola	plastid	46.2	31.37
AT5G17170.1	Thale cress	plastid	46.2	31.37
CDY02732	Canola	plastid	45.65	31.11
Bra023597.1-P	Field mustard	plastid	45.65	31.0
CDY16955	Canola	plastid	41.3	30.89
Solyc03g096850.2.1	Tomato	plastid	45.11	29.86
KRH27766	Soybean	nucleus	57.07	29.17
PGSC0003DMT400001532	Potato	plastid	44.02	29.14
HORVU7Hr1G067110.3	Barley	plastid	45.11	27.3
OQU79958	Sorghum	plastid	44.57	24.55
Zm00001d024519_P005	Maize	cytosol	42.93	22.13
GSMUA_Achr3P00400_001	Banana	extracellular, plasma membrane	3.8	8.75

Protein Annotations

EMBL:ACUP02003243	EnsemblPlants:KRH58254	EnsemblPlantsGene:GLYMA_05G115900	PANTHER:PTHR45293	ProteinID:KRH58254	ProteinID:KRH58254.1
UniParc:UPI0006ED8645	UniProt:A0A0R0JTV4	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:30780517..30782339

Molecular Weight (calculated)

19731.6 Da

IEP (calculated)

8.492

GRAVY (calculated)

-0.218

Length

184 amino acids

Sequence
(BLAST)

001: MLSMMIAGPR QPGNDIDILA TSSCTTSPSL KNSQLSHSKA VTSPQCQKTC LQGLLLHEAK MGVSESLLLE VDKPIGLTLG QKSGSGVAVD GGGNAARARL
101: KPGDQVLYTT SFFGDELWPA DKLGFTKTAI QAKPDSIYFV FNRFSNPSRK VNVWSDMLKE ARSAISLGVD SDPQNFNNHI TSIT

Best Arabidopsis Sequence Match ( AT5G17170.2 )
(BLAST)

001: MATSGAISGA TVSSFFTKTT TTSNPSPKLH SSASLLSQKT VFQGVSLEDS KKSVSEIFAV SERKIGGLNG LRRFEIKARA AASKTIEVEV DKPLGLTLGQ
101: KQGGGVVITG VDGGGNAAKA GLKSGDQVVY TSSFFGDELW PADKLGFTKT AIQAKPDSVY FVVSRGAEVD VKKLNKRPAP PRFGRKLTET QKAKLLTFVL
201: IVDSYTLYPN LLTNSRIHTY VLNV

Arabidopsis Description

ENH1Rubredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFJ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.