Factsheet for Bra008575.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012567.1-P
Bra013361.1-P
Bra030034.1-P
Bra032817.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G17170.1	Bra030034.1-P	AT1G27300.1	21798944
AT5G17170.1	Bra032817.1-P	AT1G27300.1	21798944
AT5G17170.1	Bra012567.1-P	AT4G19030.1	21798944
AT5G17170.1	Bra013361.1-P	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69400	Canola	cytosol	100.0	100.0
Bra023597.1-P	Field mustard	plastid	83.16	58.3
AT5G17170.1	Thale cress	plastid	82.63	57.93
KRH77719	Soybean	nucleus, plastid	78.42	54.38
Os08t0162600-01	Rice	plastid	71.05	51.92
TraesCS7A01G294700.1	Wheat	plastid	69.47	50.97
TraesCS7B01G189500.2	Wheat	plastid	69.47	50.97
TraesCS7D01G293100.1	Wheat	plastid	69.47	50.97
GSMUA_Achr3P00400_001	Banana	extracellular, plasma membrane	21.05	50.0
Solyc03g096850.2.1	Tomato	plastid	73.16	50.0
PGSC0003DMT400001532	Potato	plastid	72.63	49.64
GSMUA_Achr3P00390_001	Banana	plastid	45.79	45.31
VIT_16s0039g02540.t01	Wine grape	plastid	61.58	43.66
HORVU7Hr1G067110.3	Barley	plastid	69.47	43.42
KRH27766	Soybean	nucleus	77.89	41.11
OQU79958	Sorghum	plastid	70.53	40.12
Zm00001d024519_P005	Maize	cytosol	71.05	37.82
KRH58254	Soybean	plastid	33.68	34.78

Protein Annotations

Gene3D:2.20.28.10	Gene3D:2.30.42.10	MapMan:35.2	EnsemblPlantsGene:Bra008575	EnsemblPlants:Bra008575.1	EnsemblPlants:Bra008575.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005506	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001478	InterPro:IPR024934	UniProt:M4CWH8	InterPro:PDZ	InterPro:PDZ_sf
PFscan:PS50106	PFscan:PS50903	PANTHER:PTHR45293	InterPro:Rubredoxin-like_dom	SUPFAM:SSF50156	SUPFAM:SSF57802
TMHMM:TMhelix	UniParc:UPI00025446A7	SEG:seg	:	:	:

Description

AT5G17170 (E=2e-065) ENH1 | ENH1 (enhancer of sos3-1); electron carrier/ metal ion binding / protein binding

Coordinates

chrA10:-:12882224..12883175

Molecular Weight (calculated)

20128.6 Da

IEP (calculated)

10.194

GRAVY (calculated)

-0.086

Length

190 amino acids

Sequence
(BLAST)

001: MRLPRKGYPL GGLGQKQGGG VVITGVEGGG NAAKAGLKSG DQVLYTSSFF GDELWPADKL RFSKTAIQAK PDSVYFVVSR GAEVDVKKLN KRSAPPRFGR
101: KLTETQKASI ARATHICLDC GFIYTLPKPF DEQPETYVCP QCIAPKKRFA RYDVNTGKAI GGGLPPIGVI VGLLAGLGAV GALLVYGSLQ

Best Arabidopsis Sequence Match ( AT5G17170.1 )
(BLAST)

001: MATSGAISGA TVSSFFTKTT TTSNPSPKLH SSASLLSQKT VFQGVSLEDS KKSVSEIFAV SERKIGGLNG LRRFEIKARA AASKTIEVEV DKPLGLTLGQ
101: KQGGGVVITG VDGGGNAAKA GLKSGDQVVY TSSFFGDELW PADKLGFTKT AIQAKPDSVY FVVSRGAEVD VKKLNKRPAP PRFGRKLTET QKARATHICL
201: DCGFIYTLPK SFDEQPDTYV CPQCIAPKKR FAKYDVNTGK AIGGGLPPIG VIVGLLAGLG AVGALLVYGL Q

Arabidopsis Description

ENH1Rubredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFJ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.