CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05123

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G17170.1	EES05123	AT1G27300.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0162600-01	Rice	plastid	66.77	85.77
TraesCS7D01G293100.1	Wheat	plastid	63.17	81.47
TraesCS7A01G294700.1	Wheat	plastid	63.17	81.47
TraesCS7B01G189500.2	Wheat	plastid	62.87	81.08
Bra008575.1-P	Field mustard	cytosol	40.12	70.53
CDX69400	Canola	cytosol	40.12	70.53
HORVU7Hr1G067110.3	Barley	plastid	63.47	69.74
Zm00001d024519_P005	Maize	cytosol	73.95	69.19
VIT_16s0039g02530.t01	Wine grape	cytosol, extracellular, plasma membrane	12.28	67.21
CDY16955	Canola	plastid	48.2	65.45
CDY02732	Canola	plastid	52.4	64.81
Bra023597.1-P	Field mustard	plastid	52.4	64.58
AT5G17170.1	Thale cress	plastid	52.4	64.58
KRH77719	Soybean	nucleus, plastid	52.69	64.23
PGSC0003DMT400001532	Potato	plastid	53.29	64.03
CDX85473	Canola	plastid	51.8	63.84
Solyc03g096850.2.1	Tomato	plastid	52.4	62.95
GSMUA_Achr3P00390_001	Banana	plastid	35.93	62.5
VIT_16s0039g02540.t01	Wine grape	plastid	45.21	56.34
KRH27766	Soybean	nucleus	54.19	50.28
KRH58254	Soybean	plastid	24.55	44.57

Protein Annotations

Gene3D:2.20.28.10	Gene3D:2.30.42.10	MapMan:35.2	UniProt:A0A1Z5R871	GO:GO:0003674	GO:GO:0005488
GO:GO:0005506	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009941
GO:GO:0016020	GO:GO:0016021	InterPro:IPR001478	InterPro:IPR024934	EnsemblPlants:OQU79958	ProteinID:OQU79958
ProteinID:OQU79958.1	InterPro:PDZ	InterPro:PDZ_sf	PFscan:PS50106	PFscan:PS50903	InterPro:Rubredoxin-like_dom
EnsemblPlantsGene:SORBI_3007G052400	SUPFAM:SSF50156	SUPFAM:SSF57802	TMHMM:TMhelix	UniParc:UPI000B8B9BE7	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:5357602..5360711

Molecular Weight (calculated)

35339.6 Da

IEP (calculated)

10.735

GRAVY (calculated)

-0.178

Length

334 amino acids

Sequence
(BLAST)

001: MGACTVSRQV SVSRTVSTRP EAMSTTLALA TGRAHHRISI HPSKWQSQQP SPSSTSAGPH LHLPPSSQPL TMAATLSSVA APSLPKHGSI IRAQQQAPPS
101: IISASTTQKT AFHGVSLVDR RWAAAGHRRG GGARRRLLQV NARTAAKNIE VEVDKPLGLA LGQKPGGGVV ITSVESGGNA ARAGLKAGDQ VLYTSSFFGD
201: ELWPADKLGF TKTAIQAKPD SVYFVVSRGA EVDVKRLPKR PAPPRFGRKL TDAQKERATH ICLDCGFIYF LPKPFEEQPD EYGCPQCNAP KKRFAKYDAA
301: TGKAIGGALP PIAVIISFVI GIAGVGALLV YGLQ

Best Arabidopsis Sequence Match ( AT5G17170.1 )
(BLAST)

001: MATSGAISGA TVSSFFTKTT TTSNPSPKLH SSASLLSQKT VFQGVSLEDS KKSVSEIFAV SERKIGGLNG LRRFEIKARA AASKTIEVEV DKPLGLTLGQ
101: KQGGGVVITG VDGGGNAAKA GLKSGDQVVY TSSFFGDELW PADKLGFTKT AIQAKPDSVY FVVSRGAEVD VKKLNKRPAP PRFGRKLTET QKARATHICL
201: DCGFIYTLPK SFDEQPDTYV CPQCIAPKKR FAKYDVNTGK AIGGGLPPIG VIVGLLAGLG AVGALLVYGL Q

Arabidopsis Description

ENH1Rubredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFJ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.