Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr4P10230_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G17170.1 | GSMUA_Achr4P10230_001 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0162600-01 | Rice | plastid | 65.1 | 48.08 |
| Bra008575.1-P | Field mustard | cytosol | 45.31 | 45.79 |
| CDX69400 | Canola | cytosol | 45.31 | 45.79 |
| TraesCS7D01G293100.1 | Wheat | plastid | 60.94 | 45.17 |
| TraesCS7B01G189500.2 | Wheat | plastid | 60.42 | 44.79 |
| TraesCS7A01G294700.1 | Wheat | plastid | 60.42 | 44.79 |
| VIT_16s0039g02540.t01 | Wine grape | plastid | 62.5 | 44.78 |
| Bra023597.1-P | Field mustard | plastid | 63.02 | 44.65 |
| KRH77719 | Soybean | nucleus, plastid | 63.54 | 44.53 |
| CDY16955 | Canola | plastid | 56.77 | 44.31 |
| CDY02732 | Canola | plastid | 61.98 | 44.07 |
| CDX85473 | Canola | plastid | 61.98 | 43.91 |
| AT5G17170.1 | Thale cress | plastid | 60.94 | 43.17 |
| Solyc03g096850.2.1 | Tomato | plastid | 59.38 | 41.01 |
| PGSC0003DMT400001532 | Potato | plastid | 58.85 | 40.65 |
| KRH58254 | Soybean | plastid | 37.5 | 39.13 |
| HORVU7Hr1G067110.3 | Barley | plastid | 60.42 | 38.16 |
| OQU79958 | Sorghum | plastid | 62.5 | 35.93 |
| KRH27766 | Soybean | nucleus | 63.54 | 33.89 |
| Zm00001d024519_P005 | Maize | cytosol | 60.94 | 32.77 |
| GSMUA_Achr3P00400_001 | Banana | extracellular, plasma membrane | 2.6 | 6.25 |
| VIT_16s0039g02530.t01 | Wine grape | cytosol, extracellular, plasma membrane | 1.04 | 3.28 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P00390_001 | EnsemblPlants:GSMUA_Achr3T00390_001 | EnsemblPlantsGene:GSMUA_Achr3G00390_001 | Gene3D:2.30.42.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001478 | InterPro:PDZ | InterPro:PDZ_sf | PANTHER:PTHR45293 | PFscan:PS50106 |
| SEG:seg | SUPFAM:SSF50156 | UniParc:UPI00029618D1 | UniProt:M0SAK7 | MapMan:35.2 | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G00390_001]
Coordinates
chr3:+:322897..325528
Molecular Weight (calculated)
19673.4 Da
IEP (calculated)
10.867
GRAVY (calculated)
-0.221
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAASASAVA AATSPINHTL RATSVPPPSA TPHLFAAQKS AFHGSSLSEH KRNCSSAGMK SNGAVGGRRG LVVRAKTAGA SKNIEVDVDK PLGLTLGQKP
101: GGGVVITAVD SGGNAAKAGL KAGDQVLYTS SFFGDELWPA DKLGFTKTAI QAKPDSVYFV VSRGADVDVK RLTKRPAPPR FGRTLTESQK AS
101: GGGVVITAVD SGGNAAKAGL KAGDQVLYTS SFFGDELWPA DKLGFTKTAI QAKPDSVYFV VSRGADVDVK RLTKRPAPPR FGRTLTESQK AS
001: MATSGAISGA TVSSFFTKTT TTSNPSPKLH SSASLLSQKT VFQGVSLEDS KKSVSEIFAV SERKIGGLNG LRRFEIKARA AASKTIEVEV DKPLGLTLGQ
101: KQGGGVVITG VDGGGNAAKA GLKSGDQVVY TSSFFGDELW PADKLGFTKT AIQAKPDSVY FVVSRGAEVD VKKLNKRPAP PRFGRKLTET QKAKLLTFVL
201: IVDSYTLYPN LLTNSRIHTY VLNV
101: KQGGGVVITG VDGGGNAAKA GLKSGDQVVY TSSFFGDELW PADKLGFTKT AIQAKPDSVY FVVSRGAEVD VKKLNKRPAP PRFGRKLTET QKAKLLTFVL
201: IVDSYTLYPN LLTNSRIHTY VLNV
Arabidopsis Description
ENH1Rubredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFJ2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.