Factsheet for Bra023597.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012567.1-P
Bra013361.1-P
Bra030034.1-P
Bra032817.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G17170.1	Bra030034.1-P	AT1G27300.1	21798944
AT5G17170.1	Bra032817.1-P	AT1G27300.1	21798944
AT5G17170.1	Bra012567.1-P	AT4G19030.1	21798944
AT5G17170.1	Bra013361.1-P	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02732	Canola	plastid	98.52	98.89
CDX85473	Canola	plastid	98.16	98.16
AT5G17170.1	Thale cress	plastid	91.88	91.88
CDY16955	Canola	plastid	82.29	90.65
Bra008575.1-P	Field mustard	cytosol	58.3	83.16
KRH77719	Soybean	nucleus, plastid	76.01	75.18
Os08t0162600-01	Rice	plastid	65.68	68.46
TraesCS7B01G189500.2	Wheat	plastid	64.58	67.57
TraesCS7A01G294700.1	Wheat	plastid	64.21	67.18
PGSC0003DMT400001532	Potato	plastid	68.63	66.91
TraesCS7D01G293100.1	Wheat	plastid	63.84	66.8
Solyc03g096850.2.1	Tomato	plastid	68.27	66.55
GSMUA_Achr3P00400_001	Banana	extracellular, plasma membrane	18.82	63.75
GSMUA_Achr3P00390_001	Banana	plastid	44.65	63.02
VIT_16s0039g02540.t01	Wine grape	plastid	57.2	57.84
KRH27766	Soybean	nucleus	76.01	57.22
HORVU7Hr1G067110.3	Barley	plastid	63.1	56.25
OQU79958	Sorghum	plastid	64.58	52.4
Zm00001d024519_P005	Maize	cytosol	63.47	48.18
KRH58254	Soybean	plastid	31.0	45.65

Protein Annotations

Gene3D:2.20.28.10	Gene3D:2.30.42.10	MapMan:35.2	EnsemblPlantsGene:Bra023597	EnsemblPlants:Bra023597.1	EnsemblPlants:Bra023597.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005506	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001478	InterPro:IPR024934	UniProt:M4E494	InterPro:PDZ	InterPro:PDZ_sf
PFscan:PS50106	PFscan:PS50903	PANTHER:PTHR45293	InterPro:Rubredoxin-like_dom	SUPFAM:SSF50156	SUPFAM:SSF57802
TMHMM:TMhelix	UniParc:UPI00025430B9	SEG:seg	:	:	:

Description

AT5G17170 (E=3e-101) ENH1 | ENH1 (enhancer of sos3-1); electron carrier/ metal ion binding / protein binding

Coordinates

chrA02:+:4136192..4137611

Molecular Weight (calculated)

28489.3 Da

IEP (calculated)

10.108

GRAVY (calculated)

-0.093

Length

271 amino acids

Sequence
(BLAST)

001: MASSSAVSGA TVSSFFTKTS SASNPSPKLH SSSPLFPQKT VFQGVSLEDS KKSVSEIFAV SDRKIGGLNL SRRFEVKART AASKTIEVEV DKPLGLTLGQ
101: KQGGGVVITG VEGGGNAAKA GLKSGDQVLY TSSFFGDELW PADKLGFTKT AIQAKPDSVY FVVSRGGADV DVKKLNKRPA PPRFGRKLTE TQKATTHICL
201: DCGFIYTLPK PFDEQPDTYV CPQCIAPKKR FARYDVNTGK AIGGGLPPIG VIVGLLAGLG AVGALLVYGL Q

Best Arabidopsis Sequence Match ( AT5G17170.1 )
(BLAST)

001: MATSGAISGA TVSSFFTKTT TTSNPSPKLH SSASLLSQKT VFQGVSLEDS KKSVSEIFAV SERKIGGLNG LRRFEIKARA AASKTIEVEV DKPLGLTLGQ
101: KQGGGVVITG VDGGGNAAKA GLKSGDQVVY TSSFFGDELW PADKLGFTKT AIQAKPDSVY FVVSRGAEVD VKKLNKRPAP PRFGRKLTET QKARATHICL
201: DCGFIYTLPK SFDEQPDTYV CPQCIAPKKR FAKYDVNTGK AIGGGLPPIG VIVGLLAGLG AVGALLVYGL Q

Arabidopsis Description

ENH1Rubredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFJ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.