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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra001626.1-P
Bra002268.1-P
Bra002403.1-P
Bra003196.1-P
Bra003751.1-P
Bra004499.1-P
Bra005796.1-P
Bra006523.1-P
Bra006619.1-P
Bra006653.1-P
Bra007100.1-P
Bra007316.1-P
Bra008079.1-P
Bra008201.1-P
Bra008545.1-P
Bra008891.1-P
Bra009481.1-P
Bra009694.1-P
Bra010354.1-P
Bra010688.1-P
Bra011055.1-P
Bra011812.1-P
Bra012879.1-P
Bra013118.1-P
Bra013225.1-P
Bra013226.1-P
Bra013962.1-P
Bra014634.1-P
Bra014848.1-P
Bra015157.1-P
Bra015386.1-P
Bra015839.1-P
Bra016014.1-P
Bra016774.1-P
Bra018237.1-P
Bra018466.1-P
Bra018531.1-P
Bra019447.1-P
Bra019762.1-P
Bra019965.1-P
Bra020182.1-P
Bra021420.1-P
Bra022660.1-P
Bra022748.1-P
Bra023375.1-P
Bra024788.1-P
Bra026074.1-P
Bra026245.1-P
Bra026491.1-P
Bra026567.1-P
Bra026579.1-P
Bra026727.1-P
Bra026782.1-P
Bra027498.1-P
Bra027518.1-P
Bra028920.1-P
Bra030034.1-P
Bra030565.1-P
Bra032628.1-P
Bra032817.1-P
Bra033173.1-P
Bra033276.1-P
Bra033558.1-P
Bra033708.1-P
Bra035001.1-P
Bra035477.1-P
Bra036243.1-P
Bra036539.1-P
Bra036849.1-P
Bra037287.1-P
Bra038380.1-P
Bra039822.1-P
Bra039859.1-P
Bra040000.1-P
Bra040001.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G27300.1 Bra032628.1-P AT1G01230.1 21798944
AT1G27300.1 Bra033276.1-P AT1G01230.1 21798944
AT1G27300.1 Bra030565.1-P AT1G04340.1 21798944
AT1G27300.1 Bra015386.1-P AT1G05070.1 21798944
AT1G27300.1 Bra018466.1-P AT1G10030.1 21798944
AT1G27300.1 Bra019965.1-P AT1G10030.1 21798944
AT1G27300.1 Bra016774.1-P AT1G12390.1 21798944
AT1G27300.1 Bra019762.1-P AT1G12390.1 21798944
AT1G27300.1 Bra026782.1-P AT1G15080.1 21798944
AT1G27300.1 Bra026074.1-P AT1G16240.1 21798944
AT1G27300.1 Bra026727.1-P AT1G16240.1 21798944
AT1G27300.1 Bra030034.1-P AT1G27300.1 21798944
AT1G27300.1 Bra032817.1-P AT1G27300.1 21798944
AT1G27300.1 Bra035477.1-P AT1G33110.1 21798944
AT1G27300.1 Bra040000.1-P AT1G33110.1 21798944
AT1G27300.1 Bra040001.1-P AT1G33110.1 21798944
AT1G27300.1 Bra008079.1-P AT1G73190.1 21798944
AT1G27300.1 Bra016014.1-P AT1G73190.1 21798944
AT1G27300.1 Bra003751.1-P AT1G75500.1 21798944
AT1G27300.1 Bra008201.1-P AT1G75500.1 21798944
AT1G27300.1 Bra015839.1-P AT1G75500.1 21798944
AT1G27300.1 Bra026579.1-P AT2G02810.1 21798944
AT1G27300.1 Bra024788.1-P AT2G03120.1 21798944
AT1G27300.1 Bra026567.1-P AT2G03120.1 21798944
AT1G27300.1 Bra015157.1-P AT2G04900.1 21798944
AT1G27300.1 Bra013118.1-P AT2G14835.2 21798944
AT1G27300.1 Bra039822.1-P AT2G14835.2 21798944
AT1G27300.1 Bra010688.1-P AT2G16510.1 21798944
AT1G27300.1 Bra037287.1-P AT2G16800.1 21798944
AT1G27300.1 Bra018237.1-P AT2G31490.1 21798944
AT1G27300.1 Bra004499.1-P AT2G46890.1 21798944
AT1G27300.1 Bra036539.1-P AT2G47840.1 21798944
AT1G27300.1 Bra021420.1-P AT3G02690.1 21798944
AT1G27300.1 Bra028920.1-P AT3G02690.1 21798944
AT1G27300.1 Bra001626.1-P AT3G16240.1 21798944
AT1G27300.1 Bra013226.1-P AT3G25190.1 21798944
AT1G27300.1 Bra013225.1-P AT3G25220.1 21798944
AT1G27300.1 Bra019447.1-P AT3G43520.1 21798944
AT1G27300.1 Bra035001.1-P AT3G44220.1 21798944
AT1G27300.1 Bra006653.1-P AT3G50920.1 21798944
AT1G27300.1 Bra012879.1-P AT3G50920.1 21798944
AT1G27300.1 Bra036849.1-P AT3G50920.1 21798944
AT1G27300.1 Bra014848.1-P AT3G54020.1 21798944
AT1G27300.1 Bra003196.1-P AT3G54820.1 21798944
AT1G27300.1 Bra007100.1-P AT3G54820.1 21798944
AT1G27300.1 Bra007316.1-P AT3G57280.1 21798944
AT1G27300.1 Bra014634.1-P AT3G57280.1 21798944
AT1G27300.1 Bra008545.1-P AT4G01430.1 21798944
AT1G27300.1 Bra018531.1-P AT4G02725.1 21798944
AT1G27300.1 Bra036243.1-P AT4G02725.1 21798944
AT1G27300.1 Bra038380.1-P AT4G09580.1 21798944
AT1G27300.1 Bra033173.1-P AT4G10430.1 21798944
AT1G27300.1 Bra039859.1-P AT4G14455.1 21798944
AT1G27300.1 Bra026245.1-P AT4G17340.1 21798944
AT1G27300.1 Bra010354.1-P AT4G28720.1 21798944
AT1G27300.1 Bra011055.1-P AT4G28720.1 21798944
AT1G27300.1 Bra010688.1-P AT4G34720.1 21798944
AT1G27300.1 Bra033558.1-P AT4G38250.1 21798944
AT1G27300.1 Bra011812.1-P AT4G40042.1 21798944
AT1G27300.1 Bra005796.1-P AT5G04160.1 21798944
AT1G27300.1 Bra009481.1-P AT5G04160.1 21798944
AT1G27300.1 Bra008891.1-P AT5G12390.1 21798944
AT1G27300.1 Bra023375.1-P AT5G12390.1 21798944
AT1G27300.1 Bra013962.1-P AT5G17630.1 21798944
AT1G27300.1 Bra002268.1-P AT5G19875.1 21798944
AT1G27300.1 Bra006523.1-P AT5G19875.1 21798944
AT1G27300.1 Bra002403.1-P AT5G22290.1 21798944
AT1G27300.1 Bra006619.1-P AT5G22290.1 21798944
AT1G27300.1 Bra020182.1-P AT5G22290.1 21798944
AT1G27300.1 Bra009694.1-P AT5G23550.1 21798944
AT1G27300.1 Bra026491.1-P AT5G23550.1 21798944
AT1G27300.1 Bra027498.1-P AT5G43460.1 21798944
AT1G27300.1 Bra027518.1-P AT5G43970.1 21798944
AT1G27300.1 Bra033708.1-P AT5G43970.1 21798944
AT1G27300.1 Bra022748.1-P AT5G51010.1 21798944
AT1G27300.1 Bra022660.1-P AT5G53560.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27605 Canola cytosol 97.01 97.01
Bra030034.1-P Field mustard cytosol 74.13 75.25
AT1G27300.1 Thale cress nucleus 68.16 68.5
VIT_01s0010g03800.t01 Wine grape cytosol 32.34 33.16
KRH31520 Soybean cytosol 22.89 30.26
KRG97393 Soybean nucleus 25.37 27.13
Solyc05g015640.2.1 Tomato cytosol 26.87 26.73
KRH76090 Soybean nucleus 14.93 26.09
PGSC0003DMT400084737 Potato cytosol 26.37 25.6
HORVU2Hr1G084420.1 Barley cytosol 23.88 25.0
TraesCS2D01G345400.1 Wheat cytosol 24.38 25.0
TraesCS2A01G346700.1 Wheat cytosol 23.88 24.74
TraesCS2B01G365000.1 Wheat cytosol 22.89 23.96
Zm00001d016570_P001 Maize cytosol 23.88 22.33
Zm00001d050563_P001 Maize nucleus 22.39 22.28
EES05123 Sorghum nucleus 22.89 21.4
Os02t0509600-01 Rice plasma membrane 22.39 21.33
Protein Annotations
EnsemblPlants:Bra032817.1EnsemblPlants:Bra032817.1-PEnsemblPlantsGene:Bra032817ncoils:CoilPANTHER:PTHR35280SEG:seg
UniParc:UPI00025425F4UniProt:M4EVI4MapMan:35.2:::
Description
AT1G27300 (E=5e-053) | unknown protein
Coordinates
chrA09:-:12614256..12615336
Molecular Weight (calculated)
22914.0 Da
IEP (calculated)
4.620
GRAVY (calculated)
-0.718
Length
201 amino acids
Sequence
(BLAST)
001: MESSEDVEVL SRAIEKLLDE KRKREAAGDS FIEDEDDQLL LTRLISQLES PNSIQKTVVT AKDEEGESSP VSSPSKGKQE DKRRLEESIE EIAKDIKEVK
101: RQNKVTHILL SALIILTLTW QLSEYSMIYM MKERLTHPIR SIGGMLFGGF QREFLPIKNR LQGTSNDKEE NNLHNGNGTN NGVHIQVPDL LREFGFDDDD
201: Q
Best Arabidopsis Sequence Match ( AT1G27300.1 )
(BLAST)
001: MESSEDVENL SRAIEKLLHE KRKREASGDA FIEDADDQLF LSSLISQLES PNPKGKEDVI TGEEEEKEEE SADSSPSKGK SEGQRQLEES IEEIAKDIKK
101: VKKQNKITHV LLSATIILTL VWQLSEYSMI FMLKDRISHP VRSIGGMLNG MFKGKLRPIK NQLAGTSNSN DQNNHGNGSH TGPQLQVPEL LREFGFDDEE
Arabidopsis Description
F17L21.9 [Source:UniProtKB/TrEMBL;Acc:Q9FZK5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.