Factsheet for Bra027518.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus, cytosol

Predictor Summary:

nucleus 2
golgi 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012567.1-P
Bra013361.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G43970.1	Bra012567.1-P	AT4G19030.1	21798944
AT5G43970.1	Bra013361.1-P	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36964	Canola	mitochondrion	93.94	93.0
CDY13134	Canola	cytosol, golgi, plastid	86.87	86.0
Bra033708.1-P	Field mustard	cytosol, golgi, nucleus	81.82	83.51
AT5G43970.1	Thale cress	cytosol	80.81	80.81
KRH19624	Soybean	mitochondrion	61.62	62.89
VIT_05s0049g01870.t01	Wine grape	plastid	60.61	61.86
KRH32248	Soybean	plastid	60.61	61.86
VIT_07s0005g04240.t01	Wine grape	mitochondrion	61.62	61.0
Bra015286.1-P	Field mustard	cytosol, golgi, nucleus	57.58	59.38
Os02t0496900-01	Rice	mitochondrion	55.56	59.14
Os02t0131600-00	Rice	cytosol	50.51	58.82
EES14032	Sorghum	cytosol, golgi, mitochondrion, plastid	54.55	58.06
TraesCS2B01G399400.1	Wheat	mitochondrion	52.53	57.78
TraesCS7D01G280500.1	Wheat	plastid	51.52	56.67
TraesCS7B01G179400.1	Wheat	plastid	51.52	56.67
TraesCS7A01G282000.1	Wheat	plastid	51.52	56.67
TraesCS2B01G399500.1	Wheat	mitochondrion, plastid	51.52	56.67
TraesCS2A01G382100.1	Wheat	plastid	51.52	56.67
Zm00001d031852_P001	Maize	plastid	53.54	56.38
KRH71585	Soybean	mitochondrion	48.48	55.81
KRH30220	Soybean	plastid	54.55	55.67
KRH30340	Soybean	plastid	54.55	55.67
Solyc06g008120.1.1	Tomato	nucleus	58.59	54.21
Solyc03g005700.1.1	Tomato	cytosol, plastid	53.54	53.0
PGSC0003DMT400035001	Potato	plastid	52.53	50.98
HORVU7Hr1G064180.5	Barley	cytosol, plastid	51.52	48.11
TraesCS2D01G378600.1	Wheat	plastid	50.51	45.87
OQU83182	Sorghum	endoplasmic reticulum	29.29	34.94

Protein Annotations

EnsemblPlants:Bra027518.1	EnsemblPlants:Bra027518.1-P	EnsemblPlantsGene:Bra027518	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	InterPro:Tom22	InterPro:Tom22_pln	PANTHER:PTHR12504	PANTHER:PTHR12504:SF0
PIRSF:PIRSF038151	TMHMM:TMhelix	UniParc:UPI00025427DA	UniProt:M4EFF6	MapMan:23.2.1.4	:

Description

AT5G43970 (E=2e-037) TOM22-V, TOM9-2, ATTOM22-V | TOM22-V (TRANSLOCASE OF OUTER MEMBRANE 22-V); P-P-bond-hydrolysis-driven protein transmembrane transporter

Coordinates

chrA09:-:13628563..13628862

Molecular Weight (calculated)

10496.8 Da

IEP (calculated)

10.193

GRAVY (calculated)

-0.001

Length

99 amino acids

Sequence
(BLAST)

1: MAKRIGGAGK SRDEDSTILG RISNSDIVSH GRRAAGDAVG VSKKLLWSTG KAAWIAGTTF LILVVPLIIE MDREAQLNEI DLQQASLLGA PAQPMQRGV

Best Arabidopsis Sequence Match ( AT5G43970.1 )
(BLAST)

1: MAAKRIGAGK SGGGDPNILA RISNSEIVSQ GRRAAGDAVE VSKKLLRSTG KAAWIAGTTF LILVVPLIIE MDREAQINEI ELQQASLLGA PPSPMQRGL

Arabidopsis Description

TOM9-2TOM9-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UKM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.