CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid, golgi, mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
golgi 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031852_P001	Maize	plastid	90.32	89.36
Os02t0496900-01	Rice	mitochondrion	84.95	84.95
TraesCS7B01G179400.1	Wheat	plastid	79.57	82.22
TraesCS7A01G282000.1	Wheat	plastid	79.57	82.22
TraesCS7D01G280500.1	Wheat	plastid	78.49	81.11
TraesCS2A01G382100.1	Wheat	plastid	78.49	81.11
TraesCS2B01G399400.1	Wheat	mitochondrion	77.42	80.0
Os02t0131600-00	Rice	cytosol	72.04	78.82
TraesCS2B01G399500.1	Wheat	mitochondrion, plastid	75.27	77.78
TraesCS2D01G378600.1	Wheat	plastid	74.19	63.3
HORVU7Hr1G064180.5	Barley	cytosol, plastid	72.04	63.21
KRH32248	Soybean	plastid	64.52	61.86
KRH19624	Soybean	mitochondrion	64.52	61.86
AT5G43970.1	Thale cress	cytosol	62.37	58.59
VIT_05s0049g01870.t01	Wine grape	plastid	59.14	56.7
KRH30340	Soybean	plastid	58.06	55.67
CDX94732	Canola	golgi, mitochondrion, plastid	58.06	55.67
CDY13134	Canola	cytosol, golgi, plastid	59.14	55.0
CDY36964	Canola	mitochondrion	59.14	55.0
Bra027518.1-P	Field mustard	cytosol, golgi, nucleus	58.06	54.55
CDY22321	Canola	cytosol, golgi, plastid	55.91	53.61
Bra033708.1-P	Field mustard	cytosol, golgi, nucleus	55.91	53.61
CDX96932	Canola	extracellular, golgi, mitochondrion	56.99	53.54
CDY18202	Canola	mitochondrion	54.84	53.12
Bra015286.1-P	Field mustard	cytosol, golgi, nucleus	53.76	52.08
KRH71585	Soybean	mitochondrion	47.31	51.16
CDX89847	Canola	cytosol	52.69	51.04
VIT_07s0005g04240.t01	Wine grape	mitochondrion	54.84	51.0
KRH30220	Soybean	plastid	52.69	50.52
Solyc06g008120.1.1	Tomato	nucleus	56.99	49.53
Solyc03g005700.1.1	Tomato	cytosol, plastid	51.61	48.0
AT1G04070.1	Thale cress	golgi, mitochondrion, plastid	47.31	46.81
PGSC0003DMT400035001	Potato	plastid	50.54	46.08
OQU83182	Sorghum	endoplasmic reticulum	38.71	43.37

Protein Annotations

MapMan:23.2.1.4	EntrezGene:8056918	UniProt:C5YMQ1	EnsemblPlants:EES14032	ProteinID:EES14032	ProteinID:EES14032.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005741	GO:GO:0005742	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
GO:GO:0009987	GO:GO:0015266	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0030150
GO:GO:0031307	GO:GO:0045040	PFAM:PF04281	PIRSF:PIRSF038151	PANTHER:PTHR12504	PANTHER:PTHR12504:SF0
EnsemblPlantsGene:SORBI_3007G161700	TMHMM:TMhelix	InterPro:Tom22	InterPro:Tom22_pln	UniParc:UPI0001A87B3C	RefSeq:XP_002444537.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:59613790..59614958

Molecular Weight (calculated)

9612.8 Da

IEP (calculated)

10.605

GRAVY (calculated)

0.027

Length

93 amino acids

Sequence
(BLAST)

1: MPPSSALSKR GGGGDGILAA ISRSQVAAHG REAAAMAKKL LRSTGKAAWI AGTTFLVLVV PLIIEMDREQ QLNDLELQQQ TLLGGPPPPA AAK

Best Arabidopsis Sequence Match ( AT5G43970.1 )
(BLAST)

1: MAAKRIGAGK SGGGDPNILA RISNSEIVSQ GRRAAGDAVE VSKKLLRSTG KAAWIAGTTF LILVVPLIIE MDREAQINEI ELQQASLLGA PPSPMQRGL

Arabidopsis Description

TOM9-2TOM9-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UKM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.