Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30220 | Soybean | plastid | 93.02 | 82.47 |
| KRH19624 | Soybean | mitochondrion | 84.88 | 75.26 |
| KRH32248 | Soybean | plastid | 81.4 | 72.16 |
| KRH30340 | Soybean | plastid | 76.74 | 68.04 |
| VIT_05s0049g01870.t01 | Wine grape | plastid | 58.14 | 51.55 |
| Os02t0131600-00 | Rice | cytosol | 50.0 | 50.59 |
| Os02t0496900-01 | Rice | mitochondrion | 54.65 | 50.54 |
| Bra027518.1-P | Field mustard | cytosol, golgi, nucleus | 55.81 | 48.48 |
| TraesCS2B01G399400.1 | Wheat | mitochondrion | 50.0 | 47.78 |
| CDX94732 | Canola | golgi, mitochondrion, plastid | 53.49 | 47.42 |
| EES14032 | Sorghum | cytosol, golgi, mitochondrion, plastid | 51.16 | 47.31 |
| CDY36964 | Canola | mitochondrion | 54.65 | 47.0 |
| Zm00001d031852_P001 | Maize | plastid | 51.16 | 46.81 |
| TraesCS7D01G280500.1 | Wheat | plastid | 48.84 | 46.67 |
| TraesCS7B01G179400.1 | Wheat | plastid | 48.84 | 46.67 |
| TraesCS7A01G282000.1 | Wheat | plastid | 48.84 | 46.67 |
| TraesCS2A01G382100.1 | Wheat | plastid | 48.84 | 46.67 |
| CDY22321 | Canola | cytosol, golgi, plastid | 52.33 | 46.39 |
| Bra033708.1-P | Field mustard | cytosol, golgi, nucleus | 52.33 | 46.39 |
| CDY13134 | Canola | cytosol, golgi, plastid | 53.49 | 46.0 |
| Solyc06g008120.1.1 | Tomato | nucleus | 56.98 | 45.79 |
| TraesCS2B01G399500.1 | Wheat | mitochondrion, plastid | 47.67 | 45.56 |
| CDX96932 | Canola | extracellular, golgi, mitochondrion | 52.33 | 45.45 |
| AT5G43970.1 | Thale cress | cytosol | 52.33 | 45.45 |
| Solyc03g005700.1.1 | Tomato | cytosol, plastid | 51.16 | 44.0 |
| PGSC0003DMT400035001 | Potato | plastid | 51.16 | 43.14 |
| HORVU7Hr1G064180.5 | Barley | cytosol, plastid | 48.84 | 39.62 |
| CDY18202 | Canola | mitochondrion | 43.02 | 38.54 |
| TraesCS2D01G378600.1 | Wheat | plastid | 47.67 | 37.61 |
| CDX89847 | Canola | cytosol | 41.86 | 37.5 |
| Bra015286.1-P | Field mustard | cytosol, golgi, nucleus | 41.86 | 37.5 |
| AT1G04070.1 | Thale cress | golgi, mitochondrion, plastid | 40.7 | 37.23 |
| OQU83182 | Sorghum | endoplasmic reticulum | 23.26 | 24.1 |
Protein Annotations
| EntrezGene:106797833 | MapMan:23.2.1.4 | EMBL:ACUP02000914 | EnsemblPlantsGene:GLYMA_02G156900 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005741 |
| GO:GO:0005742 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015266 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030150 | GO:GO:0031307 | GO:GO:0045040 | UniProt:I1JFK1 |
| EnsemblPlants:KRH71585 | ProteinID:KRH71585 | ProteinID:KRH71585.1 | PANTHER:PTHR12504 | PANTHER:PTHR12504:SF0 | InterPro:Tom22 |
| UniParc:UPI0002964AAA | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:16829754..16830014
Molecular Weight (calculated)
9376.3 Da
IEP (calculated)
8.542
GRAVY (calculated)
-0.006
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MASRRGGVSL PDRPSNNSSS VLTNISCSSI VTHGKEAAGD AAFVTKKLLH STGKVVWITD TTFLFLVVPF IVKMDREQQL NDLELQ
1: MAAKRIGAGK SGGGDPNILA RISNSEIVSQ GRRAAGDAVE VSKKLLRSTG KAAWIAGTTF LILVVPLIIE MDREAQINEI ELQQASLLGA PPSPMQRGL
Arabidopsis Description
TOM9-2TOM9-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UKM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.