Factsheet for HORVU7Hr1G064180.5

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G43970.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G399400.1	Wheat	mitochondrion	73.58	86.67
TraesCS7B01G179400.1	Wheat	plastid	72.64	85.56
TraesCS7A01G282000.1	Wheat	plastid	72.64	85.56
TraesCS7D01G280500.1	Wheat	plastid	71.7	84.44
TraesCS2A01G382100.1	Wheat	plastid	71.7	84.44
TraesCS2B01G399500.1	Wheat	mitochondrion, plastid	67.92	80.0
TraesCS2D01G378600.1	Wheat	plastid	81.13	78.9
EES14032	Sorghum	cytosol, golgi, mitochondrion, plastid	63.21	72.04
Os02t0496900-01	Rice	mitochondrion	62.26	70.97
Zm00001d031852_P001	Maize	plastid	62.26	70.21
Os02t0131600-00	Rice	cytosol	54.72	68.24
KRH32248	Soybean	plastid	54.72	59.79
KRH19624	Soybean	mitochondrion	53.77	58.76
VIT_05s0049g01870.t01	Wine grape	plastid	50.0	54.64
CDX94732	Canola	golgi, mitochondrion, plastid	49.06	53.61
AT5G43970.1	Thale cress	cytosol	50.0	53.54
CDY36964	Canola	mitochondrion	49.06	52.0
CDY22321	Canola	cytosol, golgi, plastid	47.17	51.55
Bra033708.1-P	Field mustard	cytosol, golgi, nucleus	47.17	51.55
CDX96932	Canola	extracellular, golgi, mitochondrion	48.11	51.52
Bra027518.1-P	Field mustard	cytosol, golgi, nucleus	48.11	51.52
CDY13134	Canola	cytosol, golgi, plastid	47.17	50.0
KRH30340	Soybean	plastid	45.28	49.48
VIT_07s0005g04240.t01	Wine grape	mitochondrion	46.23	49.0
KRH71585	Soybean	mitochondrion	39.62	48.84
PGSC0003DMT400035001	Potato	plastid	46.23	48.04
Solyc03g005700.1.1	Tomato	cytosol, plastid	45.28	48.0
CDY18202	Canola	mitochondrion	43.4	47.92
Bra015286.1-P	Field mustard	cytosol, golgi, nucleus	43.4	47.92
KRH30220	Soybean	plastid	43.4	47.42
CDX89847	Canola	cytosol	42.45	46.88
Solyc06g008120.1.1	Tomato	nucleus	45.28	44.86
AT1G04070.1	Thale cress	golgi, mitochondrion, plastid	39.62	44.68

Protein Annotations

MapMan:23.2.1.4	UniProt:A0A287WQ40	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:HORVU7Hr1G064180	EnsemblPlants:HORVU7Hr1G064180.5	PFAM:PF04281	PIRSF:PIRSF038151	PANTHER:PTHR12504
PANTHER:PTHR12504:SF0	TMHMM:TMhelix	InterPro:Tom22	InterPro:Tom22_pln	UniParc:UPI000B47D667	SEG:seg

Description

No Description!

Coordinates

chrchr7H:+:316888767..316890781

Molecular Weight (calculated)

10855.0 Da

IEP (calculated)

9.317

GRAVY (calculated)

0.002

Length

106 amino acids

Sequence
(BLAST)

001: SNQSLPSSPD QNKGEGMASS SAVSKRGDAG GVLAAISRSS VAAHGREAAA VAGKLLRSTG KAAWIAGTTF LVLVVPLIIE MDREQQMVDL DLQQQALLGS
101: PPTLAK

Best Arabidopsis Sequence Match ( AT5G43970.1 )
(BLAST)

1: MAAKRIGAGK SGGGDPNILA RISNSEIVSQ GRRAAGDAVE VSKKLLRSTG KAAWIAGTTF LILVVPLIIE MDREAQINEI ELQQASLLGA PPSPMQRGL

Arabidopsis Description

TOM9-2TOM9-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UKM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.