Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94732 | Canola | golgi, mitochondrion, plastid | 82.83 | 84.54 |
| CDY36964 | Canola | mitochondrion | 83.84 | 83.0 |
| CDX96932 | Canola | extracellular, golgi, mitochondrion | 82.83 | 82.83 |
| Bra033708.1-P | Field mustard | cytosol, golgi, nucleus | 80.81 | 82.47 |
| CDY22321 | Canola | cytosol, golgi, plastid | 79.8 | 81.44 |
| Bra027518.1-P | Field mustard | cytosol, golgi, nucleus | 80.81 | 80.81 |
| CDY13134 | Canola | cytosol, golgi, plastid | 78.79 | 78.0 |
| AT1G04070.1 | Thale cress | golgi, mitochondrion, plastid | 62.63 | 65.96 |
| Os02t0131600-00 | Rice | cytosol | 54.55 | 63.53 |
| EES14032 | Sorghum | cytosol, golgi, mitochondrion, plastid | 58.59 | 62.37 |
| Os02t0496900-01 | Rice | mitochondrion | 58.59 | 62.37 |
| KRH19624 | Soybean | mitochondrion | 60.61 | 61.86 |
| KRH32248 | Soybean | plastid | 59.6 | 60.82 |
| Zm00001d031852_P001 | Maize | plastid | 57.58 | 60.64 |
| TraesCS2A01G382100.1 | Wheat | plastid | 54.55 | 60.0 |
| VIT_07s0005g04240.t01 | Wine grape | mitochondrion | 60.61 | 60.0 |
| TraesCS7A01G282000.1 | Wheat | plastid | 54.55 | 60.0 |
| TraesCS7B01G179400.1 | Wheat | plastid | 54.55 | 60.0 |
| VIT_05s0049g01870.t01 | Wine grape | plastid | 58.59 | 59.79 |
| TraesCS2B01G399400.1 | Wheat | mitochondrion | 53.54 | 58.89 |
| TraesCS7D01G280500.1 | Wheat | plastid | 53.54 | 58.89 |
| TraesCS2B01G399500.1 | Wheat | mitochondrion, plastid | 51.52 | 56.67 |
| Solyc06g008120.1.1 | Tomato | nucleus | 60.61 | 56.07 |
| KRH30340 | Soybean | plastid | 52.53 | 53.61 |
| KRH30220 | Soybean | plastid | 52.53 | 53.61 |
| Solyc03g005700.1.1 | Tomato | cytosol, plastid | 53.54 | 53.0 |
| KRH71585 | Soybean | mitochondrion | 45.45 | 52.33 |
| PGSC0003DMT400035001 | Potato | plastid | 52.53 | 50.98 |
| HORVU7Hr1G064180.5 | Barley | cytosol, plastid | 53.54 | 50.0 |
| TraesCS2D01G378600.1 | Wheat | plastid | 53.54 | 48.62 |
| OQU83182 | Sorghum | endoplasmic reticulum | 33.33 | 39.76 |
Protein Annotations
| MapMan:23.2.1.4 | EntrezGene:834420 | UniProt:A0A178UKM7 | ProteinID:AED95039.1 | ArrayExpress:AT5G43970 | EnsemblPlantsGene:AT5G43970 |
| RefSeq:AT5G43970 | TAIR:AT5G43970 | RefSeq:AT5G43970-TAIR-G | EnsemblPlants:AT5G43970.1 | TAIR:AT5G43970.1 | EMBL:AY052270 |
| EMBL:AY060520 | EMBL:AY088551 | ProteinID:BAB09057.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005741 | GO:GO:0005742 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006626 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0015266 | GO:GO:0015450 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016043 | GO:GO:0030150 | GO:GO:0031307 | GO:GO:0045040 | RefSeq:NP_199210.1 |
| ProteinID:OAO93847.1 | PFAM:PF04281 | PIRSF:PIRSF038151 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR12504 | PANTHER:PTHR12504:SF0 | UniProt:Q9FNC9 | TMHMM:TMhelix | Symbol:TOM22-V | InterPro:Tom22 |
| InterPro:Tom22_pln | UniParc:UPI0000001450 | : | : | : | : |
Description
TOM9-2TOM9-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UKM7]
Coordinates
chr5:+:17692786..17693481
Molecular Weight (calculated)
10378.7 Da
IEP (calculated)
10.596
GRAVY (calculated)
0.036
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MAAKRIGAGK SGGGDPNILA RISNSEIVSQ GRRAAGDAVE VSKKLLRSTG KAAWIAGTTF LILVVPLIIE MDREAQINEI ELQQASLLGA PPSPMQRGL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.