Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 3
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES14032 | Sorghum | cytosol, golgi, mitochondrion, plastid | 43.37 | 38.71 |
| KRH32248 | Soybean | plastid | 39.76 | 34.02 |
| KRH19624 | Soybean | mitochondrion | 39.76 | 34.02 |
| AT5G43970.1 | Thale cress | cytosol | 39.76 | 33.33 |
| Solyc03g005700.1.1 | Tomato | cytosol, plastid | 39.76 | 33.0 |
| PGSC0003DMT400035001 | Potato | plastid | 39.76 | 32.35 |
| CDX94732 | Canola | golgi, mitochondrion, plastid | 37.35 | 31.96 |
| VIT_05s0049g01870.t01 | Wine grape | plastid | 37.35 | 31.96 |
| CDY18202 | Canola | mitochondrion | 36.14 | 31.25 |
| CDX89847 | Canola | cytosol | 36.14 | 31.25 |
| Bra015286.1-P | Field mustard | cytosol, golgi, nucleus | 36.14 | 31.25 |
| CDY22321 | Canola | cytosol, golgi, plastid | 36.14 | 30.93 |
| Bra033708.1-P | Field mustard | cytosol, golgi, nucleus | 36.14 | 30.93 |
| CDX96932 | Canola | extracellular, golgi, mitochondrion | 36.14 | 30.3 |
| KRH30340 | Soybean | plastid | 34.94 | 29.9 |
| AT1G04070.1 | Thale cress | golgi, mitochondrion, plastid | 33.73 | 29.79 |
| Bra027518.1-P | Field mustard | cytosol, golgi, nucleus | 34.94 | 29.29 |
| VIT_07s0005g04240.t01 | Wine grape | mitochondrion | 34.94 | 29.0 |
| CDY36964 | Canola | mitochondrion | 33.73 | 28.0 |
| CDY13134 | Canola | cytosol, golgi, plastid | 32.53 | 27.0 |
| Solyc06g008120.1.1 | Tomato | nucleus | 33.73 | 26.17 |
| KRH30220 | Soybean | plastid | 28.92 | 24.74 |
| KRH71585 | Soybean | mitochondrion | 24.1 | 23.26 |
Protein Annotations
| MapMan:23.2.1.4 | UniProt:A0A1Z5RHE6 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005741 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlants:OQU83182 | ProteinID:OQU83182 | ProteinID:OQU83182.1 | PFAM:PF04281 | PANTHER:PTHR12504 |
| PANTHER:PTHR12504:SF0 | EnsemblPlantsGene:SORBI_3005G089300 | TMHMM:TMhelix | InterPro:Tom22 | UniParc:UPI000B8BACBD | SEG:seg |
Description
hypothetical protein
Coordinates
chr5:-:12794294..12794545
Molecular Weight (calculated)
8909.7 Da
IEP (calculated)
4.355
GRAVY (calculated)
0.061
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: MAEAESAGNT MSSSVAAIAA MAEKLARSVG KAAWQAGTTF LVLGLPLLFV VEREMQIQQM EYEHNSQMET LLGGPPAVNN SYY
1: MAAKRIGAGK SGGGDPNILA RISNSEIVSQ GRRAAGDAVE VSKKLLRSTG KAAWIAGTTF LILVVPLIIE MDREAQINEI ELQQASLLGA PPSPMQRGL
Arabidopsis Description
TOM9-2TOM9-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UKM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.