Factsheet for Bra033708.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, golgi

Predictor Summary:

nucleus 2
golgi 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012567.1-P
Bra013361.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G43970.1	Bra012567.1-P	AT4G19030.1	21798944
AT5G43970.1	Bra013361.1-P	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22321	Canola	cytosol, golgi, plastid	98.97	98.97
Bra027518.1-P	Field mustard	cytosol, golgi, nucleus	83.51	81.82
AT5G43970.1	Thale cress	cytosol	82.47	80.81
KRH19624	Soybean	mitochondrion	62.89	62.89
Bra015286.1-P	Field mustard	cytosol, golgi, nucleus	61.86	62.5
KRH32248	Soybean	plastid	61.86	61.86
VIT_07s0005g04240.t01	Wine grape	mitochondrion	60.82	59.0
VIT_05s0049g01870.t01	Wine grape	plastid	57.73	57.73
Os02t0131600-00	Rice	cytosol	50.52	57.65
TraesCS2B01G399400.1	Wheat	mitochondrion	52.58	56.67
Os02t0496900-01	Rice	mitochondrion	53.61	55.91
EES14032	Sorghum	cytosol, golgi, mitochondrion, plastid	53.61	55.91
TraesCS2A01G382100.1	Wheat	plastid	51.55	55.56
TraesCS7A01G282000.1	Wheat	plastid	51.55	55.56
TraesCS7B01G179400.1	Wheat	plastid	51.55	55.56
KRH30340	Soybean	plastid	54.64	54.64
TraesCS2B01G399500.1	Wheat	mitochondrion, plastid	50.52	54.44
TraesCS7D01G280500.1	Wheat	plastid	50.52	54.44
Zm00001d031852_P001	Maize	plastid	52.58	54.26
KRH30220	Soybean	plastid	53.61	53.61
Solyc06g008120.1.1	Tomato	nucleus	58.76	53.27
KRH71585	Soybean	mitochondrion	46.39	52.33
Solyc03g005700.1.1	Tomato	cytosol, plastid	51.55	50.0
PGSC0003DMT400035001	Potato	plastid	50.52	48.04
HORVU7Hr1G064180.5	Barley	cytosol, plastid	51.55	47.17
TraesCS2D01G378600.1	Wheat	plastid	50.52	44.95
OQU83182	Sorghum	endoplasmic reticulum	30.93	36.14

Protein Annotations

MapMan:23.2.1.4	EnsemblPlantsGene:Bra033708	EnsemblPlants:Bra033708.1	EnsemblPlants:Bra033708.1-P	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	UniProt:M4EY18	PIRSF:PIRSF038151	PANTHER:PTHR12504
PANTHER:PTHR12504:SF0	TMHMM:TMhelix	InterPro:Tom22	InterPro:Tom22_pln	UniParc:UPI000253F71C	SEG:seg

Description

AT5G43970 (E=3e-032) TOM22-V, TOM9-2, ATTOM22-V | TOM22-V (TRANSLOCASE OF OUTER MEMBRANE 22-V); P-P-bond-hydrolysis-driven protein transmembrane transporter

Coordinates

chrA06:-:25494210..25494503

Molecular Weight (calculated)

10114.3 Da

IEP (calculated)

10.487

GRAVY (calculated)

0.127

Length

97 amino acids

Sequence
(BLAST)

1: MAAKRFGGAG KSGGGDSNIM AKISNSEIVS QGRRVAGDAV GVSKKLLWST GKAAWIAGTT FLILVVPLII EMDREAQLNE IDLQQASLLG APAQRGF

Best Arabidopsis Sequence Match ( AT5G43970.1 )
(BLAST)

1: MAAKRIGAGK SGGGDPNILA RISNSEIVSQ GRRAAGDAVE VSKKLLRSTG KAAWIAGTTF LILVVPLIIE MDREAQINEI ELQQASLLGA PPSPMQRGL

Arabidopsis Description

TOM9-2TOM9-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UKM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.