Factsheet for Zm00001d031852_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

plastid: 23198870
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14032	Sorghum	cytosol, golgi, mitochondrion, plastid	89.36	90.32
Os02t0496900-01	Rice	mitochondrion	81.91	82.8
Os02t0131600-00	Rice	cytosol	72.34	80.0
TraesCS7B01G179400.1	Wheat	plastid	75.53	78.89
TraesCS7A01G282000.1	Wheat	plastid	75.53	78.89
TraesCS7D01G280500.1	Wheat	plastid	74.47	77.78
TraesCS2A01G382100.1	Wheat	plastid	74.47	77.78
TraesCS2B01G399400.1	Wheat	mitochondrion	73.4	76.67
TraesCS2B01G399500.1	Wheat	mitochondrion, plastid	71.28	74.44
HORVU7Hr1G064180.5	Barley	cytosol, plastid	70.21	62.26
KRH32248	Soybean	plastid	62.77	60.82
KRH19624	Soybean	mitochondrion	62.77	60.82
TraesCS2D01G378600.1	Wheat	plastid	70.21	60.55
AT5G43970.1	Thale cress	cytosol	60.64	57.58
CDX94732	Canola	golgi, mitochondrion, plastid	56.38	54.64
VIT_05s0049g01870.t01	Wine grape	plastid	56.38	54.64
CDY36964	Canola	mitochondrion	57.45	54.0
KRH30340	Soybean	plastid	55.32	53.61
Bra027518.1-P	Field mustard	cytosol, golgi, nucleus	56.38	53.54
CDY13134	Canola	cytosol, golgi, plastid	56.38	53.0
CDY22321	Canola	cytosol, golgi, plastid	54.26	52.58
Bra033708.1-P	Field mustard	cytosol, golgi, nucleus	54.26	52.58
CDX96932	Canola	extracellular, golgi, mitochondrion	55.32	52.53
KRH71585	Soybean	mitochondrion	46.81	51.16
CDY18202	Canola	mitochondrion	52.13	51.04
VIT_07s0005g04240.t01	Wine grape	mitochondrion	54.26	51.0
Bra015286.1-P	Field mustard	cytosol, golgi, nucleus	51.06	50.0
KRH30220	Soybean	plastid	51.06	49.48
CDX89847	Canola	cytosol	50.0	48.96
Solyc06g008120.1.1	Tomato	nucleus	55.32	48.6
Solyc03g005700.1.1	Tomato	cytosol, plastid	51.06	48.0
PGSC0003DMT400035001	Potato	plastid	50.0	46.08
AT1G04070.1	Thale cress	golgi, mitochondrion, plastid	44.68	44.68

Protein Annotations

EntrezGene:100282126	MapMan:23.2.1.4	UniProt:B6T3V3	EMBL:EU959668	EMBL:EU961168	EMBL:EU973270
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	ProteinID:ONM03808.1
PFAM:PF04281	PIRSF:PIRSF038151	PANTHER:PTHR12504	PANTHER:PTHR12504:SF0	TMHMM:TMhelix	InterPro:Tom22
InterPro:Tom22_pln	UniParc:UPI000182BEA3	EnsemblPlantsGene:Zm00001d031852	EnsemblPlants:Zm00001d031852_P001	EnsemblPlants:Zm00001d031852_T001	SEG:seg

Description

Mitochondrial import receptor subunit TOM22

Coordinates

chr1:+:204140568..204140852

Molecular Weight (calculated)

9765.9 Da

IEP (calculated)

10.198

GRAVY (calculated)

-0.055

Length

94 amino acids

Sequence
(BLAST)

1: MPTPSALSKR GGDGGDGILA ALSRSQVAAH GREAAAVAKK LLRSTGKAAW IAGTTFLVLV VPLIIEMDRE QQLNDLELQQ QTLLGGAPPP PPTK

Best Arabidopsis Sequence Match ( AT5G43970.1 )
(BLAST)

1: MAAKRIGAGK SGGGDPNILA RISNSEIVSQ GRRAAGDAVE VSKKLLRSTG KAAWIAGTTF LILVVPLIIE MDREAQINEI ELQQASLLGA PPSPMQRGL

Arabidopsis Description

TOM9-2TOM9-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UKM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.