Subcellular Localization
min:
: max
Winner_takes_all: plastid, mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G179400.1 | Wheat | plastid | 91.11 | 91.11 |
| TraesCS2B01G399400.1 | Wheat | mitochondrion | 91.11 | 91.11 |
| EES14032 | Sorghum | cytosol, golgi, mitochondrion, plastid | 77.78 | 75.27 |
| Zm00001d031852_P001 | Maize | plastid | 74.44 | 71.28 |
| Os02t0496900-01 | Rice | mitochondrion | 73.33 | 70.97 |
| Os02t0131600-00 | Rice | cytosol | 65.56 | 69.41 |
| HORVU7Hr1G064180.5 | Barley | cytosol, plastid | 80.0 | 67.92 |
| TraesCS2D01G378600.1 | Wheat | plastid | 81.11 | 66.97 |
| KRH32248 | Soybean | plastid | 61.11 | 56.7 |
| KRH19624 | Soybean | mitochondrion | 61.11 | 56.7 |
| CDX94732 | Canola | golgi, mitochondrion, plastid | 56.67 | 52.58 |
| AT5G43970.1 | Thale cress | cytosol | 56.67 | 51.52 |
| Bra027518.1-P | Field mustard | cytosol, golgi, nucleus | 56.67 | 51.52 |
| CDY36964 | Canola | mitochondrion | 56.67 | 51.0 |
| CDY22321 | Canola | cytosol, golgi, plastid | 54.44 | 50.52 |
| KRH30340 | Soybean | plastid | 54.44 | 50.52 |
| Bra033708.1-P | Field mustard | cytosol, golgi, nucleus | 54.44 | 50.52 |
| VIT_05s0049g01870.t01 | Wine grape | plastid | 54.44 | 50.52 |
| VIT_07s0005g04240.t01 | Wine grape | mitochondrion | 55.56 | 50.0 |
| CDX96932 | Canola | extracellular, golgi, mitochondrion | 54.44 | 49.49 |
| CDY13134 | Canola | cytosol, golgi, plastid | 53.33 | 48.0 |
| CDY18202 | Canola | mitochondrion | 51.11 | 47.92 |
| Bra015286.1-P | Field mustard | cytosol, golgi, nucleus | 51.11 | 47.92 |
| KRH71585 | Soybean | mitochondrion | 45.56 | 47.67 |
| KRH30220 | Soybean | plastid | 51.11 | 47.42 |
| Solyc03g005700.1.1 | Tomato | cytosol, plastid | 52.22 | 47.0 |
| CDX89847 | Canola | cytosol | 50.0 | 46.88 |
| PGSC0003DMT400035001 | Potato | plastid | 51.11 | 45.1 |
| Solyc06g008120.1.1 | Tomato | nucleus | 52.22 | 43.93 |
| AT1G04070.1 | Thale cress | golgi, mitochondrion, plastid | 45.56 | 43.62 |
Protein Annotations
| MapMan:23.2.1.4 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005741 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 | PFAM:PF04281 |
| PIRSF:PIRSF038151 | PANTHER:PTHR12504 | PANTHER:PTHR12504:SF0 | TMHMM:TMhelix | InterPro:Tom22 | InterPro:Tom22_pln |
| EnsemblPlantsGene:TraesCS2B01G399500 | EnsemblPlants:TraesCS2B01G399500.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2B:+:567578048..567578320
Molecular Weight (calculated)
9361.6 Da
IEP (calculated)
9.436
GRAVY (calculated)
0.434
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MASSSVVSRR GDTGGILAPI SLSLVAAHGR EAAAVAGKLL RSTGKAAWIV GTTFLVLVVP LIIEMDREQQ MVDLDLQQQA LLGSPPPLAK
1: MAAKRIGAGK SGGGDPNILA RISNSEIVSQ GRRAAGDAVE VSKKLLRSTG KAAWIAGTTF LILVVPLIIE MDREAQINEI ELQQASLLGA PPSPMQRGL
Arabidopsis Description
TOM9-2TOM9-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UKM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.