Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- endoplasmic reticulum 1
- mitochondrion 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_10s0003g01830.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G43970.1 | VIT_10s0003g01830.t01 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32248 | Soybean | plastid | 63.92 | 63.92 |
| KRH19624 | Soybean | mitochondrion | 62.89 | 62.89 |
| VIT_07s0005g04240.t01 | Wine grape | mitochondrion | 63.92 | 62.0 |
| Os02t0131600-00 | Rice | cytosol | 53.61 | 61.18 |
| Bra027518.1-P | Field mustard | cytosol, golgi, nucleus | 61.86 | 60.61 |
| CDY13134 | Canola | cytosol, golgi, plastid | 61.86 | 60.0 |
| Os02t0496900-01 | Rice | mitochondrion | 56.7 | 59.14 |
| EES14032 | Sorghum | cytosol, golgi, mitochondrion, plastid | 56.7 | 59.14 |
| CDY36964 | Canola | mitochondrion | 60.82 | 59.0 |
| CDX94732 | Canola | golgi, mitochondrion, plastid | 58.76 | 58.76 |
| KRH30340 | Soybean | plastid | 58.76 | 58.76 |
| AT5G43970.1 | Thale cress | cytosol | 59.79 | 58.59 |
| KRH71585 | Soybean | mitochondrion | 51.55 | 58.14 |
| Bra033708.1-P | Field mustard | cytosol, golgi, nucleus | 57.73 | 57.73 |
| CDY22321 | Canola | cytosol, golgi, plastid | 57.73 | 57.73 |
| CDX96932 | Canola | extracellular, golgi, mitochondrion | 58.76 | 57.58 |
| KRH30220 | Soybean | plastid | 56.7 | 56.7 |
| TraesCS7D01G280500.1 | Wheat | plastid | 52.58 | 56.67 |
| Zm00001d031852_P001 | Maize | plastid | 54.64 | 56.38 |
| TraesCS7B01G179400.1 | Wheat | plastid | 51.55 | 55.56 |
| TraesCS7A01G282000.1 | Wheat | plastid | 51.55 | 55.56 |
| TraesCS2B01G399400.1 | Wheat | mitochondrion | 51.55 | 55.56 |
| TraesCS2A01G382100.1 | Wheat | plastid | 51.55 | 55.56 |
| Solyc06g008120.1.1 | Tomato | nucleus | 60.82 | 55.14 |
| Solyc03g005700.1.1 | Tomato | cytosol, plastid | 56.7 | 55.0 |
| TraesCS2B01G399500.1 | Wheat | mitochondrion, plastid | 50.52 | 54.44 |
| AT1G04070.1 | Thale cress | golgi, mitochondrion, plastid | 51.55 | 53.19 |
| PGSC0003DMT400035001 | Potato | plastid | 55.67 | 52.94 |
| CDY18202 | Canola | mitochondrion | 49.48 | 50.0 |
| HORVU7Hr1G064180.5 | Barley | cytosol, plastid | 54.64 | 50.0 |
| Bra015286.1-P | Field mustard | cytosol, golgi, nucleus | 48.45 | 48.96 |
| CDX89847 | Canola | cytosol | 48.45 | 48.96 |
| TraesCS2D01G378600.1 | Wheat | plastid | 53.61 | 47.71 |
| OQU83182 | Sorghum | endoplasmic reticulum | 31.96 | 37.35 |
Protein Annotations
| EntrezGene:100254428 | wikigene:100254428 | MapMan:23.2.1.4 | ProteinID:CBI23717 | ProteinID:CBI23717.3 | UniProt:D7SZN8 |
| EMBL:FN595496 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005741 | GO:GO:0005742 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015266 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0030150 | GO:GO:0031307 | GO:GO:0045040 | EntrezGene:LOC100254428 | wikigene:LOC100254428 | PIRSF:PIRSF038151 |
| PANTHER:PTHR12504 | PANTHER:PTHR12504:SF0 | TMHMM:TMhelix | InterPro:Tom22 | InterPro:Tom22_pln | UniParc:UPI00015C77AD |
| ArrayExpress:VIT_05s0049g01870 | EnsemblPlantsGene:VIT_05s0049g01870 | EnsemblPlants:VIT_05s0049g01870.t01 | RefSeq:XP_002282101 | RefSeq:XP_002282101.1 | SEG:seg |
Description
No Description!
Coordinates
chr5:-:9334352..9334824
Molecular Weight (calculated)
10218.3 Da
IEP (calculated)
10.361
GRAVY (calculated)
0.008
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MAGGSSDSKS NSGLVSRISN SISGSGIMFH GKRAASDAAY VTKKLLRSTG KAAWIAGTTF VILVVPLIIE MDREQQLNDL DLQQATLLGT TPLPARN
1: MAAKRIGAGK SGGGDPNILA RISNSEIVSQ GRRAAGDAVE VSKKLLRSTG KAAWIAGTTF LILVVPLIIE MDREAQINEI ELQQASLLGA PPSPMQRGL
Arabidopsis Description
TOM9-2TOM9-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UKM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.