Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7B01G179400.1 | Wheat | plastid | 98.89 | 98.89 |
TraesCS7A01G282000.1 | Wheat | plastid | 98.89 | 98.89 |
TraesCS2A01G382100.1 | Wheat | plastid | 97.78 | 97.78 |
TraesCS2B01G399400.1 | Wheat | mitochondrion | 96.67 | 96.67 |
EES14032 | Sorghum | cytosol, golgi, mitochondrion, plastid | 81.11 | 78.49 |
Zm00001d031852_P001 | Maize | plastid | 77.78 | 74.47 |
Os02t0496900-01 | Rice | mitochondrion | 75.56 | 73.12 |
HORVU7Hr1G064180.5 | Barley | cytosol, plastid | 84.44 | 71.7 |
TraesCS2D01G378600.1 | Wheat | plastid | 85.56 | 70.64 |
Os02t0131600-00 | Rice | cytosol | 65.56 | 69.41 |
KRH32248 | Soybean | plastid | 63.33 | 58.76 |
KRH19624 | Soybean | mitochondrion | 63.33 | 58.76 |
AT5G43970.1 | Thale cress | cytosol | 58.89 | 53.54 |
VIT_05s0049g01870.t01 | Wine grape | plastid | 56.67 | 52.58 |
CDX94732 | Canola | golgi, mitochondrion, plastid | 56.67 | 52.58 |
CDY36964 | Canola | mitochondrion | 57.78 | 52.0 |
Bra027518.1-P | Field mustard | cytosol, golgi, nucleus | 56.67 | 51.52 |
KRH30340 | Soybean | plastid | 54.44 | 50.52 |
Bra033708.1-P | Field mustard | cytosol, golgi, nucleus | 54.44 | 50.52 |
CDY13134 | Canola | cytosol, golgi, plastid | 55.56 | 50.0 |
VIT_07s0005g04240.t01 | Wine grape | mitochondrion | 55.56 | 50.0 |
CDX96932 | Canola | extracellular, golgi, mitochondrion | 54.44 | 49.49 |
CDY22321 | Canola | cytosol, golgi, plastid | 53.33 | 49.48 |
CDY18202 | Canola | mitochondrion | 52.22 | 48.96 |
KRH71585 | Soybean | mitochondrion | 46.67 | 48.84 |
KRH30220 | Soybean | plastid | 52.22 | 48.45 |
Bra015286.1-P | Field mustard | cytosol, golgi, nucleus | 51.11 | 47.92 |
Solyc03g005700.1.1 | Tomato | cytosol, plastid | 52.22 | 47.0 |
CDX89847 | Canola | cytosol | 50.0 | 46.88 |
PGSC0003DMT400035001 | Potato | plastid | 52.22 | 46.08 |
Solyc06g008120.1.1 | Tomato | nucleus | 54.44 | 45.79 |
AT1G04070.1 | Thale cress | golgi, mitochondrion, plastid | 46.67 | 44.68 |
Protein Annotations
EnsemblPlants:TraesCS7D01G280500.1 | EnsemblPlantsGene:TraesCS7D01G280500 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0005739 | GO:GO:0005741 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 |
InterPro:Tom22 | InterPro:Tom22_pln | PANTHER:PTHR12504 | PANTHER:PTHR12504:SF0 | PFAM:PF04281 | PIRSF:PIRSF038151 |
SEG:seg | TMHMM:TMhelix | MapMan:23.2.1.4 | : | : | : |
Description
No Description!
Coordinates
chr7D:-:273855106..273855378
Molecular Weight (calculated)
9240.3 Da
IEP (calculated)
10.315
GRAVY (calculated)
0.278
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MASSSAVSKR GDAGGVLSAI SRSSVAAHGR EAAAVAGKLL RSTGKAAWIA GTTFLVLVVP LIIEMDREQQ MVDLDLQQQA LLGSPPPLAK
1: MAAKRIGAGK SGGGDPNILA RISNSEIVSQ GRRAAGDAVE VSKKLLRSTG KAAWIAGTTF LILVVPLIIE MDREAQINEI ELQQASLLGA PPSPMQRGL
Arabidopsis Description
TOM9-2TOM9-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UKM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.