Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G179400.1 | Wheat | plastid | 100.0 | 100.0 |
| TraesCS7D01G280500.1 | Wheat | plastid | 98.89 | 98.89 |
| TraesCS2A01G382100.1 | Wheat | plastid | 98.89 | 98.89 |
| EES14032 | Sorghum | cytosol, golgi, mitochondrion, plastid | 82.22 | 79.57 |
| Zm00001d031852_P001 | Maize | plastid | 78.89 | 75.53 |
| Os02t0496900-01 | Rice | mitochondrion | 76.67 | 74.19 |
| HORVU7Hr1G064180.5 | Barley | cytosol, plastid | 85.56 | 72.64 |
| Os02t0131600-00 | Rice | cytosol | 66.67 | 70.59 |
| KRH32248 | Soybean | plastid | 64.44 | 59.79 |
| KRH19624 | Soybean | mitochondrion | 64.44 | 59.79 |
| AT5G43970.1 | Thale cress | cytosol | 60.0 | 54.55 |
| CDX94732 | Canola | golgi, mitochondrion, plastid | 57.78 | 53.61 |
| CDY36964 | Canola | mitochondrion | 57.78 | 52.0 |
| VIT_05s0049g01870.t01 | Wine grape | plastid | 55.56 | 51.55 |
| Bra033708.1-P | Field mustard | cytosol, golgi, nucleus | 55.56 | 51.55 |
| Bra027518.1-P | Field mustard | cytosol, golgi, nucleus | 56.67 | 51.52 |
| CDY22321 | Canola | cytosol, golgi, plastid | 54.44 | 50.52 |
| KRH30340 | Soybean | plastid | 54.44 | 50.52 |
| CDY18202 | Canola | mitochondrion | 53.33 | 50.0 |
| CDY13134 | Canola | cytosol, golgi, plastid | 55.56 | 50.0 |
| CDX96932 | Canola | extracellular, golgi, mitochondrion | 54.44 | 49.49 |
| VIT_07s0005g04240.t01 | Wine grape | mitochondrion | 54.44 | 49.0 |
| Bra015286.1-P | Field mustard | cytosol, golgi, nucleus | 52.22 | 48.96 |
| KRH71585 | Soybean | mitochondrion | 46.67 | 48.84 |
| KRH30220 | Soybean | plastid | 52.22 | 48.45 |
| Solyc03g005700.1.1 | Tomato | cytosol, plastid | 53.33 | 48.0 |
| CDX89847 | Canola | cytosol | 51.11 | 47.92 |
| PGSC0003DMT400035001 | Potato | plastid | 53.33 | 47.06 |
| AT1G04070.1 | Thale cress | golgi, mitochondrion, plastid | 47.78 | 45.74 |
| Solyc06g008120.1.1 | Tomato | nucleus | 53.33 | 44.86 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G282000.1 | EnsemblPlantsGene:TraesCS7A01G282000 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005741 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 |
| InterPro:Tom22 | InterPro:Tom22_pln | PANTHER:PTHR12504 | PANTHER:PTHR12504:SF0 | PFAM:PF04281 | PIRSF:PIRSF038151 |
| SEG:seg | TMHMM:TMhelix | MapMan:23.2.1.4 | : | : | : |
Description
No Description!
Coordinates
chr7A:-:307377939..307378211
Molecular Weight (calculated)
9224.3 Da
IEP (calculated)
10.315
GRAVY (calculated)
0.307
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MASSSAVSKR GDAGGVLAAI SRSSVAAHGR EAAAVAGKLL RSTGKAAWIA GTTFLVLVVP LIIEMDREQQ MVDLDLQQQA LLGSPPPLAK
1: MAAKRIGAGK SGGGDPNILA RISNSEIVSQ GRRAAGDAVE VSKKLLRSTG KAAWIAGTTF LILVVPLIIE MDREAQINEI ELQQASLLGA PPSPMQRGL
Arabidopsis Description
TOM9-2TOM9-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UKM7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.