Factsheet for Bra011812.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra003423.1-P
Bra006619.1-P
Bra007547.1-P
Bra012567.1-P
Bra013361.1-P
Bra014481.1-P
Bra020182.1-P
Bra026434.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G40042.1	Bra003423.1-P	AT3G60600.1	21798944
AT4G40042.1	Bra007547.1-P	AT3G60600.1	21798944
AT4G40042.1	Bra014481.1-P	AT3G60600.1	21798944
AT4G40042.1	Bra012567.1-P	AT4G19030.1	21798944
AT4G40042.1	Bra013361.1-P	AT4G19030.1	21798944
AT4G40042.1	Bra026434.1-P	AT4G26455.1	21798944
AT4G40042.1	Bra002403.1-P	AT5G22290.1	21798944
AT4G40042.1	Bra006619.1-P	AT5G22290.1	21798944
AT4G40042.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75701	Canola	golgi, plasma membrane	100.0	100.0
AT4G40042.1	Thale cress	golgi, plasma membrane, vacuole	87.91	86.02
Bra038525.1-P	Field mustard	endoplasmic reticulum, golgi	75.82	77.53
KRH58761	Soybean	plasma membrane	72.53	70.97
KRH42659	Soybean	golgi, plasma membrane	72.53	70.97
KRG97437	Soybean	golgi, plasma membrane	71.43	69.89
KRH31466	Soybean	golgi, plasma membrane	69.23	67.74
VIT_01s0010g03360.t01	Wine grape	golgi, nucleus, plasma membrane	73.63	63.81
EER91131	Sorghum	golgi, plasma membrane, vacuole	64.84	60.82
Zm00001d013642_P001	Maize	golgi, plasma membrane, vacuole	63.74	60.42
Solyc03g005740.1.1	Tomato	extracellular, golgi, plasma membrane	52.75	60.0
TraesCS3D01G348600.1	Wheat	golgi, plasma membrane, vacuole	63.74	59.79
TraesCS3A01G354600.1	Wheat	golgi, plasma membrane, vacuole	62.64	58.76
TraesCS3B01G387600.1	Wheat	golgi	62.64	58.76
GSMUA_Achr3P16130_001	Banana	endoplasmic reticulum, golgi, plasma membrane	60.44	57.29
Zm00001d033479_P001	Maize	extracellular	53.85	56.98
HORVU3Hr1G087090.2	Barley	endoplasmic reticulum	52.75	55.17
KRH00092	Soybean	extracellular, plasma membrane, vacuole	39.56	46.15
GSMUA_Achr1P13530_001	Banana	mitochondrion	68.13	44.6
GSMUA_Achr8P28280_001	Banana	golgi, mitochondrion, plasma membrane, plastid	75.82	43.12
Os12t0438900-01	Rice	endoplasmic reticulum, plasma membrane, plastid	65.93	42.86

Protein Annotations

MapMan:18.10.1.1.2	EnsemblPlantsGene:Bra011812	EnsemblPlants:Bra011812.1	EnsemblPlants:Bra011812.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005787
GO:GO:0006465	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	UniProt:M4D5Q5	PFAM:PF06645	PANTHER:PTHR13202
PANTHER:PTHR13202:SF2	InterPro:SPC12	TMHMM:TMhelix	UniParc:UPI000254623E	SEG:seg	:

Description

AT2G22425 (E=2e-026) | peptidase

Coordinates

chrA01:+:407308..407583

Molecular Weight (calculated)

10215.7 Da

IEP (calculated)

10.420

GRAVY (calculated)

0.079

Length

91 amino acids

Sequence
(BLAST)

1: MDWQGQKLAE QLMQILLLIA AVVAFVVGYT TASFRTMMLI YAGGVGVTTL ITVPNWPFFN RHPLKWLEPS EAEKHPKPEV VVSSKKKSSK K

Best Arabidopsis Sequence Match ( AT4G40042.1 )
(BLAST)

1: MDWQGQKLAE QLMQILLLIA AVVSFVVGYT TASFRMMMLI YAGGVVLTTL ITIPNWPCFN RHHLKWLDPS EAEKHPKPQV VVVSSKKKSS SKK

Arabidopsis Description

At4g40042 [Source:UniProtKB/TrEMBL;Acc:Q84MC9]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.