Factsheet for AT4G40042.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 6
extracellular 5
vacuole 5
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011812.1-P	Field mustard	golgi, plasma membrane	86.02	87.91
CDX69361	Canola	golgi, plasma membrane	86.02	87.91
CDX75701	Canola	golgi, plasma membrane	86.02	87.91
AT2G22425.1	Thale cress	endoplasmic reticulum, extracellular, golgi	78.49	79.35
KRH42659	Soybean	golgi, plasma membrane	70.97	70.97
KRH58761	Soybean	plasma membrane	69.89	69.89
KRG97437	Soybean	golgi, plasma membrane	69.89	69.89
KRH31466	Soybean	golgi, plasma membrane	67.74	67.74
VIT_01s0010g03360.t01	Wine grape	golgi, nucleus, plasma membrane	70.97	62.86
EER91131	Sorghum	golgi, plasma membrane, vacuole	63.44	60.82
GSMUA_Achr3P16130_001	Banana	endoplasmic reticulum, golgi, plasma membrane	62.37	60.42
Zm00001d013642_P001	Maize	golgi, plasma membrane, vacuole	62.37	60.42
TraesCS3D01G348600.1	Wheat	golgi, plasma membrane, vacuole	62.37	59.79
TraesCS3A01G354600.1	Wheat	golgi, plasma membrane, vacuole	61.29	58.76
TraesCS3B01G387600.1	Wheat	golgi	61.29	58.76
Solyc03g005740.1.1	Tomato	extracellular, golgi, plasma membrane	50.54	58.75
Zm00001d033479_P001	Maize	extracellular	52.69	56.98
HORVU3Hr1G087090.2	Barley	endoplasmic reticulum	51.61	55.17
KRH00092	Soybean	extracellular, plasma membrane, vacuole	41.94	50.0
GSMUA_Achr1P13530_001	Banana	mitochondrion	66.67	44.6
Os12t0438900-01	Rice	endoplasmic reticulum, plasma membrane, plastid	64.52	42.86
GSMUA_Achr8P28280_001	Banana	golgi, mitochondrion, plasma membrane, plastid	73.12	42.5

Protein Annotations

MapMan:18.10.1.1.2	EntrezGene:816774	EntrezGene:830166	UniProt:A0A178V1K0	ProteinID:AAM15302.1	ProteinID:AEC07302.1
ProteinID:AEC07303.1	ProteinID:AEE87160.1	EMBL:AF428383	ArrayExpress:AT4G40042	EnsemblPlantsGene:AT4G40042	RefSeq:AT4G40042
TAIR:AT4G40042	RefSeq:AT4G40042-TAIR-G	EnsemblPlants:AT4G40042.1	TAIR:AT4G40042.1	EMBL:AY087762	EMBL:AY143801
EMBL:BT006391	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005787	GO:GO:0005789	GO:GO:0006465	GO:GO:0006508
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	GO:GO:0030176	GO:GO:0031090	GO:GO:0043231
GO:GO:0045047	RefSeq:NP_001077942.1	RefSeq:NP_565535.1	RefSeq:NP_680778.2	ProteinID:OAO98962.1	ProteinID:OAP08239.1
PFAM:PF06645	PO:PO:0000293	PANTHER:PTHR13202	UniProt:Q84MC9	InterPro:SPC12	TMHMM:TMhelix
UniParc:UPI0000190A2F	SEG:seg	:	:	:	:

Description

At4g40042 [Source:UniProtKB/TrEMBL;Acc:Q84MC9]

Coordinates

chr4:+:18559097..18559570

Molecular Weight (calculated)

10499.1 Da

IEP (calculated)

10.422

GRAVY (calculated)

0.142

Length

93 amino acids

Sequence
(BLAST)

1: MDWQGQKLAE QLMQILLLIA AVVSFVVGYT TASFRMMMLI YAGGVVLTTL ITIPNWPCFN RHHLKWLDPS EAEKHPKPQV VVVSSKKKSS SKK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.