Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 6
- extracellular 6
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76926 | Canola | golgi, plasma membrane | 88.04 | 91.01 |
| Bra038525.1-P | Field mustard | endoplasmic reticulum, golgi | 86.96 | 89.89 |
| CDY13762 | Canola | endoplasmic reticulum, golgi | 85.87 | 88.76 |
| AT4G40042.1 | Thale cress | golgi, plasma membrane, vacuole | 79.35 | 78.49 |
| KRH31466 | Soybean | golgi, plasma membrane | 68.48 | 67.74 |
| KRG97437 | Soybean | golgi, plasma membrane | 68.48 | 67.74 |
| KRH58761 | Soybean | plasma membrane | 66.3 | 65.59 |
| KRH42659 | Soybean | golgi, plasma membrane | 65.22 | 64.52 |
| Solyc03g005740.1.1 | Tomato | extracellular, golgi, plasma membrane | 54.35 | 62.5 |
| TraesCS3D01G348600.1 | Wheat | golgi, plasma membrane, vacuole | 64.13 | 60.82 |
| Zm00001d013642_P001 | Maize | golgi, plasma membrane, vacuole | 63.04 | 60.42 |
| EER91131 | Sorghum | golgi, plasma membrane, vacuole | 63.04 | 59.79 |
| TraesCS3A01G354600.1 | Wheat | golgi, plasma membrane, vacuole | 63.04 | 59.79 |
| TraesCS3B01G387600.1 | Wheat | golgi | 63.04 | 59.79 |
| GSMUA_Achr3P16130_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 61.96 | 59.38 |
| Zm00001d033479_P001 | Maize | extracellular | 55.43 | 59.3 |
| VIT_01s0010g03360.t01 | Wine grape | golgi, nucleus, plasma membrane | 67.39 | 59.05 |
| HORVU3Hr1G087090.2 | Barley | endoplasmic reticulum | 54.35 | 57.47 |
| KRH00092 | Soybean | extracellular, plasma membrane, vacuole | 41.3 | 48.72 |
| GSMUA_Achr1P13530_001 | Banana | mitochondrion | 66.3 | 43.88 |
| GSMUA_Achr8P28280_001 | Banana | golgi, mitochondrion, plasma membrane, plastid | 76.09 | 43.75 |
| Os12t0438900-01 | Rice | endoplasmic reticulum, plasma membrane, plastid | 65.22 | 42.86 |
Protein Annotations
| MapMan:18.10.1.1.2 | EntrezGene:816774 | UniProt:A0A178VPE5 | ProteinID:AAM15302.1 | ProteinID:AEC07302.1 | ProteinID:AEC07303.1 |
| EMBL:AF428383 | ArrayExpress:AT2G22425 | EnsemblPlantsGene:AT2G22425 | RefSeq:AT2G22425 | TAIR:AT2G22425 | RefSeq:AT2G22425-TAIR-G |
| EnsemblPlants:AT2G22425.1 | TAIR:AT2G22425.1 | EMBL:AY087762 | EMBL:AY143801 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005787 |
| GO:GO:0005789 | GO:GO:0006465 | GO:GO:0006508 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0030176 | GO:GO:0031090 | GO:GO:0043231 | GO:GO:0045047 | RefSeq:NP_001077942.1 | RefSeq:NP_565535.1 |
| ProteinID:OAP08239.1 | PFAM:PF06645 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR13202 | PANTHER:PTHR13202:SF2 | UniProt:Q944J0 | InterPro:SPC12 |
| TMHMM:TMhelix | UniParc:UPI00000010AB | SEG:seg | : | : | : |
Description
Probable signal peptidase complex subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q944J0]
Coordinates
chr2:+:9514695..9515674
Molecular Weight (calculated)
10373.9 Da
IEP (calculated)
9.868
GRAVY (calculated)
0.161
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: MDWQGQKLVE QLMQILLVIS GVVAVVVGYT TESFRTMMLI YAGGVVLTTL VTVPNWPFYN LHPLKWLDPS EAEKHPKPEV VSVASKKKFS KK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.