Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038525.1-P | Field mustard | endoplasmic reticulum, golgi | 96.63 | 96.63 |
| CDX76926 | Canola | golgi, plasma membrane | 94.38 | 94.38 |
| AT2G22425.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 88.76 | 85.87 |
| CDX69361 | Canola | golgi, plasma membrane | 78.65 | 76.92 |
| CDX75701 | Canola | golgi, plasma membrane | 78.65 | 76.92 |
| KRH58761 | Soybean | plasma membrane | 66.29 | 63.44 |
| KRH42659 | Soybean | golgi, plasma membrane | 65.17 | 62.37 |
| KRH31466 | Soybean | golgi, plasma membrane | 65.17 | 62.37 |
| KRG97437 | Soybean | golgi, plasma membrane | 65.17 | 62.37 |
| Zm00001d033479_P001 | Maize | extracellular | 57.3 | 59.3 |
| EER91131 | Sorghum | golgi, plasma membrane, vacuole | 64.04 | 58.76 |
| Solyc03g005740.1.1 | Tomato | extracellular, golgi, plasma membrane | 52.81 | 58.75 |
| TraesCS3D01G348600.1 | Wheat | golgi, plasma membrane, vacuole | 62.92 | 57.73 |
| Zm00001d013642_P001 | Maize | golgi, plasma membrane, vacuole | 61.8 | 57.29 |
| TraesCS3A01G354600.1 | Wheat | golgi, plasma membrane, vacuole | 61.8 | 56.7 |
| TraesCS3B01G387600.1 | Wheat | golgi | 61.8 | 56.7 |
| VIT_01s0010g03360.t01 | Wine grape | golgi, nucleus, plasma membrane | 66.29 | 56.19 |
| GSMUA_Achr3P16130_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 59.55 | 55.21 |
| HORVU3Hr1G087090.2 | Barley | endoplasmic reticulum | 52.81 | 54.02 |
| KRH00092 | Soybean | extracellular, plasma membrane, vacuole | 40.45 | 46.15 |
| Os12t0438900-01 | Rice | endoplasmic reticulum, plasma membrane, plastid | 65.17 | 41.43 |
| GSMUA_Achr1P13530_001 | Banana | mitochondrion | 64.04 | 41.01 |
| GSMUA_Achr8P28280_001 | Banana | golgi, mitochondrion, plasma membrane, plastid | 73.03 | 40.62 |
Protein Annotations
| KEGG:00261+3.4.-.- | KEGG:00310+3.4.-.- | KEGG:00550+3.4.-.- | KEGG:00780+3.4.-.- | MapMan:18.10.1.1.2 | GO:A0A078FL92 |
| UniProt:A0A078FL92 | EnsemblPlants:CDY13762 | ProteinID:CDY13762 | ProteinID:CDY13762.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005787 |
| GO:GO:0006465 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00078195001 | PFAM:PF06645 | PANTHER:PTHR13202 |
| PANTHER:PTHR13202:SF2 | InterPro:SPC12 | TMHMM:TMhelix | UniParc:UPI0004EE669B | SEG:seg | : |
Description
BnaA09g42640DBnaA09g42640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FL92]
Coordinates
chrLK032038:-:223760..224316
Molecular Weight (calculated)
10129.6 Da
IEP (calculated)
9.929
GRAVY (calculated)
0.084
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MDWQGQKVVE QLMQILLVIS GVVAVVVGYA TESFRTMMLI YAGGVVLATM ITVPNWPFYN RHPLEWLDPS EAEKHPKPQV VAKKRFSKK
1: MDWQGQKLVE QLMQILLVIS GVVAVVVGYT TESFRTMMLI YAGGVVLTTL VTVPNWPFYN LHPLKWLDPS EAEKHPKPEV VSVASKKKFS KK
Arabidopsis Description
Probable signal peptidase complex subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q944J0]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.