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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
MultiLoc:peroxisome
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra002403.1-P
Bra006619.1-P
Bra012567.1-P
Bra013361.1-P
Bra020182.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G28720.1 Bra012567.1-P AT4G19030.1 21798944
AT4G28720.1 Bra013361.1-P AT4G19030.1 21798944
AT4G28720.1 Bra002403.1-P AT5G22290.1 21798944
AT4G28720.1 Bra006619.1-P AT5G22290.1 21798944
AT4G28720.1 Bra020182.1-P AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35214 Canola cytosol 99.77 99.77
CDY06876 Canola cytosol 99.53 99.53
Bra010354.1-P Field mustard cytosol 92.72 92.72
AT4G28720.1 Thale cress cytosol 90.38 90.38
KRH67507 Soybean cytosol, peroxisome, plastid 77.7 78.07
KRG95789 Soybean cytosol, peroxisome, plastid 77.46 77.83
KRH19661 Soybean cytosol, endoplasmic reticulum, peroxisome 74.88 75.41
KRH32274 Soybean cytosol 74.41 74.94
Bra036002.1-P Field mustard cytosol, peroxisome, plastid 69.95 74.69
VIT_07s0005g04800.t01 Wine grape cytosol 73.94 74.29
Solyc06g083700.2.1 Tomato cytosol 72.3 74.04
PGSC0003DMT400051713 Potato cytosol 72.07 73.8
Bra015293.1-P Field mustard cytosol, peroxisome, plastid 72.54 73.57
Bra033703.1-P Field mustard cytosol, peroxisome, plastid 73.24 73.24
Bra032524.1-P Field mustard cytosol 72.3 72.99
PGSC0003DMT400038139 Potato peroxisome 69.48 72.55
Solyc09g064160.2.1 Tomato cytosol 70.66 72.53
PGSC0003DMT400056644 Potato cytosol, endoplasmic reticulum, peroxisome 70.66 72.53
Solyc06g008050.2.1 Tomato peroxisome 69.25 71.78
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 54.46 68.64
GSMUA_Achr8P12830_001 Banana cytosol, golgi, peroxisome 57.51 67.49
GSMUA_Achr5P20550_001 Banana cytosol, peroxisome, plastid 59.86 67.11
GSMUA_Achr11P... Banana cytosol 54.93 67.05
Bra032499.1-P Field mustard cytosol 65.96 66.59
GSMUA_Achr1P03360_001 Banana peroxisome 53.76 66.57
TraesCS2A01G011500.1 Wheat plastid 64.55 65.79
TraesCS2B01G010100.2 Wheat cytosol, peroxisome, plastid 64.32 65.08
Os04t0128900-01 Rice peroxisome 63.85 64.92
Bra015334.1-P Field mustard plastid 66.43 64.91
TraesCS2D01G012100.1 Wheat cytosol, peroxisome, plastid 64.08 64.85
Zm00001d004467_P001 Maize peroxisome, plasma membrane, plastid 63.62 64.37
Bra005513.1-P Field mustard cytosol, peroxisome, plastid 65.73 64.22
GSMUA_Achr4P25050_001 Banana cytosol 56.81 64.02
GSMUA_Achr1P24210_001 Banana cytosol 56.81 63.85
EES11777 Sorghum cytosol, peroxisome, plastid 63.15 63.74
GSMUA_AchrUn_... Banana mitochondrion 58.92 63.71
GSMUA_Achr11P... Banana cytosol, mitochondrion 55.63 62.86
PGSC0003DMT400056645 Potato cytosol, peroxisome, plastid 36.38 62.5
GSMUA_Achr2P04250_001 Banana cytosol 55.4 62.27
TraesCS2A01G533200.1 Wheat mitochondrion 58.22 59.62
TraesCS2B01G562800.1 Wheat mitochondrion 57.98 59.38
Os07t0437000-01 Rice mitochondrion 55.16 59.05
TraesCS2D01G535100.1 Wheat mitochondrion 57.51 58.89
Zm00001d005439_P001 Maize plastid 54.46 58.29
HORVU5Hr1G050630.3 Barley mitochondrion, plasma membrane 47.18 58.09
HORVU2Hr1G001820.1 Barley plastid 63.62 57.54
Bra008971.1-P Field mustard cytosol 54.93 56.93
TraesCS4A01G313200.1 Wheat mitochondrion 54.23 56.34
HORVU5Hr1G125560.2 Barley mitochondrion 54.46 56.04
Bra023318.1-P Field mustard plastid 53.99 55.96
KXG35000 Sorghum plastid 54.46 54.59
Bra040081.1-P Field mustard plastid 52.35 54.39
Zm00001d025005_P002 Maize cytosol, peroxisome, plastid 57.28 53.51
Bra011354.1-P Field mustard cytosol 52.35 53.35
Bra009856.1-P Field mustard cytosol, nucleus, peroxisome 53.52 52.78
Zm00001d005602_P001 Maize endoplasmic reticulum 25.35 52.68
Bra036547.1-P Field mustard cytosol 54.46 52.61
Bra020509.1-P Field mustard cytosol 53.76 52.4
HORVU2Hr1G116980.1 Barley plastid 58.22 51.88
EES15155 Sorghum peroxisome 51.17 49.21
TraesCS5B01G566700.1 Wheat golgi, mitochondrion, plasma membrane 54.23 49.15
Bra017913.1-P Field mustard cytosol 43.43 48.94
Bra018761.1-P Field mustard cytosol, extracellular, peroxisome 24.88 48.4
TraesCSU01G065000.1 Wheat cytosol, endoplasmic reticulum, golgi 24.41 47.71
Bra018763.1-P Field mustard cytosol, extracellular, peroxisome 28.4 47.45
OQU88910 Sorghum plastid 21.13 39.65
Zm00001d019527_P005 Maize peroxisome 38.5 38.14
TraesCS7D01G038500.1 Wheat cytosol, nucleus, plasma membrane 51.41 26.87
HORVU7Hr1G007860.1 Barley cytosol 50.47 25.87
Protein Annotations
MapMan:11.2.1.1.2Gene3D:3.50.50.60EnsemblPlantsGene:Bra011055EnsemblPlants:Bra011055.1EnsemblPlants:Bra011055.1-PInterPro:FAD/NAD-bd_sf
InterPro:Flavin_mOaseInterPro:Flavin_mOase-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004497
GO:GO:0004499GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0050660
GO:GO:0050661GO:GO:0055114InterPro:IPR036188UniProt:M4D3K1PFAM:PF00743PIRSF:PIRSF000332
PRINTS:PR00368PRINTS:PR00469PANTHER:PTHR43539PANTHER:PTHR43539:SF2InterPro:Pyridine_nuc-diS_OxRdtase_2SUPFAM:SSF51905
UniParc:UPI00025458EA:::::
Description
AT4G28720 (E=7e-233) | flavin-containing monooxygenase family protein / FMO family protein
Coordinates
chrA01:-:4190101..4191599
Molecular Weight (calculated)
47821.9 Da
IEP (calculated)
8.929
GRAVY (calculated)
-0.218
Length
426 amino acids
Sequence
(BLAST)
001: MENMFRLIDN DQEAATNRCI WVNGPVIVGA GPSGLATAAC LREQNVPFVV LERADCIASL WQKRTYDRLK LHLPKQFCQL PKMPFPESFP EYPTKRQFID
101: YLESYASRFD ISPKFNECVQ TARFDETSGL WRVKTVSDAE STRTEVEYIC RWLVVATGEN AERVMPEIEG LSEFTGEVVH ACDYKSGEKF AGKKVLVVGC
201: GNSGMEVSLD LANHFAKPSM VVRSSVHVMP REIMGKSTFE LAMKMLKWFP LWLVDKILLV LCWFVLGNIE KYGLKRPKMG PMELKSAKGK TPVLDIGALE
301: KIRSGKIDVV PGVKRFNGNR VELVNGEELD VDSVVLATGY RSNVPYWLQE SEFFAKNGFP KTAIGNSGWK GRTGLYAVGF TRRGLSGASM DAVNIAQDIG
401: SVWKLETKQP TKRSTASHRR CISQQF
Best Arabidopsis Sequence Match ( AT4G28720.1 )
(BLAST)
001: MENMFRLMDQ DQDLTNNRCI WVNGPVIVGA GPSGLATAAC LHEQNVPFVV LERADCIASL WQKRTYDRLK LHLPKQFCQL PKMPFPEDFP EYPTKRQFID
101: YLESYATRFE INPKFNECVQ TARFDETSGL WRVKTVSKSE STQTEVEYIC RWLVVATGEN AERVMPEIDG LSEFSGEVIH ACDYKSGEKF AGKKVLVVGC
201: GNSGMEVSLD LANHFAKPSM VVRSSLHVMP REVMGKSTFE LAMKMLRWFP LWLVDKILLV LSWMVLGNIE KYGLKRPEMG PMELKSVKGK TPVLDIGAIE
301: KIRLGKINVV PGIKRFNGNK VELVNGEQLD VDSVVLATGY RSNVPYWLQE NEFFAKNGFP KTVADNNGWK GRTGLYAVGF TRKGLSGASM DAVKIAQDIG
401: SVWQLETKQP TKRSRGSLRR CISQQF
Arabidopsis Description
YUC8Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178V2K9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.