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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 3
  • peroxisome 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:cytosol, mitochondrion, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc02g071920.2.1
Solyc03g005980.2.1
Solyc06g074170.2.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G28720.1 Solyc02g071920.2.1 AT4G19030.1 21798944
AT4G28720.1 Solyc03g005980.2.1 AT4G19030.1 21798944
AT4G28720.1 Solyc06g074170.2.1 AT5G22290.1 21798944
AT4G28720.1 Solyc11g068750.1.1 AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400056644 Potato cytosol, endoplasmic reticulum, peroxisome 96.39 96.39
Solyc06g083700.2.1 Tomato cytosol 86.02 85.82
Solyc06g008050.2.1 Tomato peroxisome 80.72 81.51
PGSC0003DMT400056645 Potato cytosol, peroxisome, plastid 46.02 77.02
VIT_07s0005g04800.t01 Wine grape cytosol 75.9 74.29
KRH67507 Soybean cytosol, peroxisome, plastid 74.46 72.88
KRG95789 Soybean cytosol, peroxisome, plastid 74.22 72.64
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 58.8 72.19
CDY14900 Canola cytosol 66.75 71.39
CDY72645 Canola cytosol 58.55 71.05
Bra036002.1-P Field mustard cytosol, peroxisome, plastid 68.19 70.93
CDY14230 Canola cytosol 67.71 70.78
CDY06876 Canola cytosol 72.53 70.66
Bra011055.1-P Field mustard cytosol 72.53 70.66
CDY35214 Canola cytosol 72.53 70.66
KRH19661 Soybean cytosol, endoplasmic reticulum, peroxisome 71.81 70.45
KRH32274 Soybean cytosol 71.33 69.98
AT5G43890.1 Thale cress cytosol 71.33 69.81
CDX97452 Canola cytosol 71.57 69.72
Bra010354.1-P Field mustard cytosol 71.57 69.72
GSMUA_Achr11P... Banana cytosol 58.55 69.63
Bra015293.1-P Field mustard cytosol, peroxisome, plastid 70.36 69.52
CDX89837 Canola cytosol, peroxisome, plastid 70.36 69.52
AT4G28720.1 Thale cress cytosol 71.33 69.48
CDY18209 Canola cytosol, peroxisome, plastid 70.6 69.43
AT1G04180.1 Thale cress cytosol 70.36 69.36
Bra033703.1-P Field mustard cytosol, peroxisome, plastid 70.6 68.78
CDY22326 Canola cytosol 70.36 68.54
CDX94734 Canola cytosol, peroxisome, plastid 70.36 68.54
CDY32533 Canola cytosol 69.64 68.48
CDY69333 Canola cytosol 68.67 68.35
Bra032524.1-P Field mustard cytosol 69.4 68.25
GSMUA_Achr5P20550_001 Banana cytosol, peroxisome, plastid 61.93 67.63
CDY10073 Canola cytosol, peroxisome, plastid 68.43 67.46
GSMUA_Achr1P03360_001 Banana peroxisome 55.66 67.15
GSMUA_Achr8P12830_001 Banana cytosol, golgi, peroxisome 58.55 66.94
GSMUA_Achr4P25050_001 Banana cytosol 60.96 66.93
GSMUA_Achr1P24210_001 Banana cytosol 60.72 66.49
TraesCS2A01G011500.1 Wheat plastid 66.75 66.27
TraesCS2D01G012100.1 Wheat cytosol, peroxisome, plastid 66.99 66.03
Os04t0128900-01 Rice peroxisome 66.02 65.39
TraesCS2B01G010100.2 Wheat cytosol, peroxisome, plastid 66.27 65.32
GSMUA_Achr11P... Banana cytosol, mitochondrion 59.04 64.99
Solyc09g091090.1.1 Tomato peroxisome 67.47 64.97
GSMUA_AchrUn_... Banana mitochondrion 60.72 63.96
GSMUA_Achr2P04250_001 Banana cytosol 58.07 63.59
EES11777 Sorghum cytosol, peroxisome, plastid 64.1 63.03
Zm00001d004467_P001 Maize peroxisome, plasma membrane, plastid 63.61 62.71
TraesCS2B01G562800.1 Wheat mitochondrion 60.96 60.82
TraesCS2A01G533200.1 Wheat mitochondrion 60.96 60.82
TraesCS2D01G535100.1 Wheat mitochondrion 60.72 60.58
HORVU2Hr1G001820.1 Barley plastid 66.75 58.81
Os07t0437000-01 Rice mitochondrion 56.39 58.79
HORVU5Hr1G050630.3 Barley mitochondrion, plasma membrane 48.67 58.38
Zm00001d005439_P001 Maize plastid 55.9 58.29
TraesCS4A01G313200.1 Wheat mitochondrion 56.87 57.56
HORVU5Hr1G125560.2 Barley mitochondrion 57.35 57.49
Solyc08g068160.1.1 Tomato cytosol 56.87 57.42
KXG35000 Sorghum plastid 56.63 55.29
Solyc06g065630.2.1 Tomato cytosol 53.49 54.15
HORVU2Hr1G116980.1 Barley plastid 60.72 52.72
Zm00001d025005_P002 Maize cytosol, peroxisome, plastid 56.39 51.32
TraesCS5B01G566700.1 Wheat golgi, mitochondrion, plasma membrane 57.83 51.06
Zm00001d005602_P001 Maize endoplasmic reticulum 24.34 49.27
EES15155 Sorghum peroxisome 52.53 49.21
TraesCSU01G065000.1 Wheat cytosol, endoplasmic reticulum, golgi 24.82 47.25
Solyc09g091870.1.1 Tomato golgi 39.76 43.31
Solyc09g091720.1.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 39.76 43.31
Solyc09g074430.2.1 Tomato cytosol 40.48 43.3
OQU88910 Sorghum plastid 21.2 38.77
Zm00001d019527_P005 Maize peroxisome 38.8 37.44
TraesCS7D01G038500.1 Wheat cytosol, nucleus, plasma membrane 51.08 26.01
HORVU7Hr1G007860.1 Barley cytosol 50.6 25.27
Protein Annotations
MapMan:11.2.1.1.2Gene3D:3.50.50.60InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOaseInterPro:Flavin_mOase-likeGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0004499GO:GO:0005488GO:GO:0005575
GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0050660
GO:GO:0050661GO:GO:0055114InterPro:IPR036188UniProt:K4CU47PFAM:PF00743PIRSF:PIRSF000332
PRINTS:PR00368PRINTS:PR00469PANTHER:PTHR43539PANTHER:PTHR43539:SF2InterPro:Pyridine_nuc-diS_OxRdtase_2SUPFAM:SSF51905
EnsemblPlantsGene:Solyc09g064160.2EnsemblPlants:Solyc09g064160.2.1TMHMM:TMhelixUniParc:UPI000276BF42::
Description
Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:K4CU47]
Coordinates
chr9:-:61256986..61258508
Molecular Weight (calculated)
46554.6 Da
IEP (calculated)
8.652
GRAVY (calculated)
-0.152
Length
415 amino acids
Sequence
(BLAST)
001: MFSFSDNDMF SRRCVWVNGP VIVGAGPSGL AVGACLKEEG VPCVILERSD CIASLWQKRT YDRLKLHLPK QFCQLPKFPF PEHYPEYPSK RQFIEYLESY
101: AKQFDLTPQF NECVQSAKYD EFCRLWRVKT VSADGAEVEY ICQWLVVATG ENAERVVPEI DGLKEFGGEV VHACDYKSGE KFRGKKVVVV GCGNSGMEVS
201: LDLCNHDAQP SMVCRSAVHV LPREIFGKST FELAMLLMTW LPLWLVDKIL LILTWFILGD IEKYGLKRPS IGPLQLKNSQ GKTPVLDIGA LEKIRAGKVK
301: VIPGIKKFSC GTVELVTGEK LEVDSVVLAT GYCSNVPYWL QETEFFSKNG YPKAQFPNNW KGKSGLYAVG FTKRGLAGAS ADAIRIAKDI GKVHKEDLKQ
401: KKQKVPTHRR CISTF
Best Arabidopsis Sequence Match ( AT4G28720.1 )
(BLAST)
001: MENMFRLMDQ DQDLTNNRCI WVNGPVIVGA GPSGLATAAC LHEQNVPFVV LERADCIASL WQKRTYDRLK LHLPKQFCQL PKMPFPEDFP EYPTKRQFID
101: YLESYATRFE INPKFNECVQ TARFDETSGL WRVKTVSKSE STQTEVEYIC RWLVVATGEN AERVMPEIDG LSEFSGEVIH ACDYKSGEKF AGKKVLVVGC
201: GNSGMEVSLD LANHFAKPSM VVRSSLHVMP REVMGKSTFE LAMKMLRWFP LWLVDKILLV LSWMVLGNIE KYGLKRPEMG PMELKSVKGK TPVLDIGAIE
301: KIRLGKINVV PGIKRFNGNK VELVNGEQLD VDSVVLATGY RSNVPYWLQE NEFFAKNGFP KTVADNNGWK GRTGLYAVGF TRKGLSGASM DAVKIAQDIG
401: SVWQLETKQP TKRSRGSLRR CISQQF
Arabidopsis Description
YUC8Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178V2K9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.