Factsheet for GSMUA_Achr1P24210_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P10230_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G28720.1	GSMUA_Achr4P10230_001	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	mitochondrion	82.06	78.93
GSMUA_Achr2P04250_001	Banana	cytosol	77.84	77.84
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	76.25	76.66
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	64.12	71.89
GSMUA_Achr11P...	Banana	cytosol	65.7	71.35
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	69.66	69.47
GSMUA_Achr1P03360_001	Banana	peroxisome	61.48	67.73
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	63.85	66.67
GSMUA_Achr4P25050_001	Banana	cytosol	65.7	65.87
CDY72645	Canola	cytosol	56.73	62.87
Solyc09g064160.2.1	Tomato	cytosol	66.49	60.72
VIT_07s0005g04800.t01	Wine grape	cytosol	67.81	60.61
Solyc06g083700.2.1	Tomato	cytosol	66.23	60.34
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	65.96	60.24
KRH67507	Soybean	cytosol, peroxisome, plastid	67.02	59.91
PGSC0003DMT400051713	Potato	cytosol	65.7	59.86
KRG95789	Soybean	cytosol, peroxisome, plastid	66.75	59.67
KRH32274	Soybean	cytosol	65.96	59.1
Solyc06g008050.2.1	Tomato	peroxisome	63.85	58.88
PGSC0003DMT400038139	Potato	peroxisome	63.06	58.58
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	65.17	58.39
KRH33524	Soybean	cytosol, peroxisome, plastid	67.81	58.28
KRG90286	Soybean	cytosol, peroxisome, plastid	67.28	58.09
AT5G43890.1	Thale cress	cytosol	64.91	58.02
Bra032499.1-P	Field mustard	cytosol	63.85	57.35
AT4G28720.1	Thale cress	cytosol	64.38	57.28
Os04t0128900-01	Rice	peroxisome	63.06	57.04
CDY14900	Canola	cytosol	58.31	56.96
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	59.89	56.89
CDY18209	Canola	cytosol, peroxisome, plastid	63.32	56.87
Bra011055.1-P	Field mustard	cytosol	63.85	56.81
CDX94734	Canola	cytosol, peroxisome, plastid	63.85	56.81
CDY35214	Canola	cytosol	63.85	56.81
CDY14230	Canola	cytosol	59.37	56.68
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	62.8	56.67
CDX89837	Canola	cytosol, peroxisome, plastid	62.8	56.67
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	63.59	56.57
CDY06876	Canola	cytosol	63.59	56.57
AT1G04180.1	Thale cress	cytosol	62.8	56.53
CDY32533	Canola	cytosol	62.8	56.4
CDY69333	Canola	cytosol	62.01	56.35
CDY22326	Canola	cytosol	63.32	56.34
Bra032524.1-P	Field mustard	cytosol	62.53	56.16
Bra010354.1-P	Field mustard	cytosol	63.06	56.1
AT2G33230.1	Thale cress	plastid	63.59	55.92
CDX97452	Canola	cytosol	62.8	55.87
TraesCS2A01G011500.1	Wheat	plastid	61.48	55.74
Bra015334.1-P	Field mustard	plastid	64.12	55.73
CDX89807	Canola	plastid	64.12	55.73
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	61.74	55.58
CDY61147	Canola	plastid	63.85	55.5
AT1G04610.1	Thale cress	cytosol	63.85	55.38
PGSC0003DMT400030255	Potato	cytosol	61.21	55.37
CDY10073	Canola	cytosol, peroxisome, plastid	61.48	55.34
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	61.21	55.11
CDY17153	Canola	peroxisome	63.32	55.05
CDY19472	Canola	cytosol, peroxisome, plastid	63.32	55.05
CDY53200	Canola	golgi, peroxisome, plastid	62.27	54.88
Bra005513.1-P	Field mustard	cytosol, peroxisome, plastid	63.06	54.82
EES11777	Sorghum	cytosol, peroxisome, plastid	60.95	54.74
Solyc09g091090.1.1	Tomato	peroxisome	61.74	54.29
VIT_05s0051g00060.t01	Wine grape	peroxisome, plastid	62.53	54.11
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	59.63	53.68
Os07t0437000-01	Rice	mitochondrion	55.15	52.51
GSMUA_Achr4P14020_001	Banana	extracellular, plasma membrane	47.76	50.84
TraesCS2B01G562800.1	Wheat	mitochondrion	55.67	50.72
GSMUA_AchrUn_...	Banana	peroxisome	45.65	50.44
GSMUA_Achr1P05290_001	Banana	peroxisome	47.23	50.28
TraesCS2A01G533200.1	Wheat	mitochondrion	55.15	50.24
TraesCS2D01G535100.1	Wheat	mitochondrion	54.88	50.0
TraesCS4A01G313200.1	Wheat	mitochondrion	53.83	49.76
Zm00001d005439_P001	Maize	plastid	52.24	49.75
HORVU2Hr1G001820.1	Barley	plastid	61.48	49.47
HORVU5Hr1G050630.3	Barley	mitochondrion, plasma membrane	45.12	49.42
TraesCSU01G065000.1	Wheat	cytosol, endoplasmic reticulum, golgi	28.23	49.08
GSMUA_Achr4P03480_001	Banana	extracellular	47.49	49.05
HORVU5Hr1G125560.2	Barley	mitochondrion	53.3	48.79
KXG35000	Sorghum	plastid	54.09	48.24
GSMUA_Achr2P19930_001	Banana	cytosol	52.24	47.83
GSMUA_Achr9P05490_001	Banana	cytosol	52.24	47.48
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	30.87	47.18
GSMUA_Achr5P06860_001	Banana	peroxisome	53.56	47.1
GSMUA_Achr4P03000_001	Banana	mitochondrion	46.17	46.54
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	48.55	46.35
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	53.83	46.05
HORVU2Hr1G116980.1	Barley	plastid	55.15	43.72
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	52.24	43.42
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	53.83	43.4
EES15155	Sorghum	peroxisome	50.66	43.34
GSMUA_Achr3P08830_001	Banana	cytosol, peroxisome, plastid	38.26	42.52
GSMUA_Achr4P14860_001	Banana	peroxisome, plastid	44.85	42.39
GSMUA_Achr9P17710_001	Banana	endoplasmic reticulum	39.58	41.55
GSMUA_Achr8P00130_001	Banana	plasma membrane	38.79	41.41
GSMUA_Achr3P10910_001	Banana	endoplasmic reticulum, golgi, vacuole	33.51	37.8
GSMUA_Achr6P17640_001	Banana	plastid	30.61	35.8
Zm00001d005602_P001	Maize	endoplasmic reticulum	18.21	33.66
GSMUA_Achr3P10900_001	Banana	cytosol, peroxisome, plasma membrane	28.5	33.64
Zm00001d019527_P005	Maize	peroxisome	33.77	29.77
OQU88910	Sorghum	plastid	15.04	25.11
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	49.08	22.82
HORVU7Hr1G007860.1	Barley	cytosol	49.34	22.5

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G24210_001	EnsemblPlants:GSMUA_Achr1P24210_001
EnsemblPlants:GSMUA_Achr1T24210_001	InterPro:IPR036188	UniProt:M0S2M8	PFAM:PF00743	PRINTS:PR00469	PANTHER:PTHR43539
PANTHER:PTHR43539:SF2	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI000295BF1D	:	:

Description

flavin monooxygenase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G24210_001]

Coordinates

chr1:-:18602260..18603675

Molecular Weight (calculated)

41835.7 Da

IEP (calculated)

8.649

GRAVY (calculated)

-0.144

Length

379 amino acids

Sequence
(BLAST)

001: MAHSSDHRDS FKRRCKWVNG PLIVGAGPSG LAVGACLKEH GVPFYPTKDQ FIDYLESYAA RFELNPQFNE TAQSAKFDDT CGMWRVRTAA SSNAEVEYIC
101: QWLVVATGEN AECVIPEMGG LKEFGGQVIH ASDYRSGEAY RGKQVLVVGY GNSGMEVCVD LCHHNSFPVM VVRDSVHVLP REICKKSTFE LAVLLMKWFP
201: VKLVDRILLA LSWMILGNME EYGLKRPSLG PLELKHKQGK TPVLDLGALG KIKSGEIKVV PGIKRLLHGG VELVDGRVID VDSVVLATGY CSNVPSWLQA
301: SRTLTDTDCF NKDGFPKQPF PNGWKGKTGL YAVGFTKRGL AGASHDAVKV AEDIGRVWRK ETKQAKHIIA CHRRCISQI

Best Arabidopsis Sequence Match ( AT5G43890.1 )
(BLAST)

001: MENMFRLMGS EDSSDRRRCI WVNGPVIVGA GPSGLATAAC LREEGVPFVV LERADCIASL WQKRTYDRIK LHLPKKVCQL PKMPFPEDYP EYPTKRQFIE
101: YLESYANKFE ITPQFNECVQ SARYDETSGL WRIKTTSSSS SGSEMEYICR WLVVATGENA EKVVPEIDGL TTEFEGEVIH SCEYKSGEKY RGKSVLVVGC
201: GNSGMEVSLD LANHNANASM VVRSSVHVLP REILGKSSFE ISMMLMKWFP LWLVDKILLI LAWLILGNLT KYGLKRPTMG PMELKIVSGK TPVLDIGAME
301: KIKSGEVEIV PGIKRFSRSH VELVDGQRLD LDAVVLATGY RSNVPSWLQE NDLFSKNGFP KSPFPNAWKG KSGLYAAGFT RKGLAGASAD AVNIAQDIGN
401: VWREETKRQK MRTRVGHRRC ISVA

Arabidopsis Description

YUC5Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178UK83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.