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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70995
CDX78905
CDX88803
CDX92368
CDX98596
CDX99411
CDY01565
CDY09128
CDY35676

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G28720.1 CDX78905 AT4G19030.1 21798944
AT4G28720.1 CDX98596 AT4G19030.1 21798944
AT4G28720.1 CDX99411 AT4G19030.1 21798944
AT4G28720.1 CDY01565 AT4G19030.1 21798944
AT4G28720.1 CDX70995 AT5G22290.1 21798944
AT4G28720.1 CDX88803 AT5G22290.1 21798944
AT4G28720.1 CDX92368 AT5G22290.1 21798944
AT4G28720.1 CDY09128 AT5G22290.1 21798944
AT4G28720.1 CDY35676 AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010354.1-P Field mustard cytosol 99.42 79.81
CDX97452 Canola cytosol 97.37 78.17
CDY14230 Canola cytosol 88.89 76.57
CDY35214 Canola cytosol 94.74 76.06
CDY06876 Canola cytosol 94.44 75.82
AT4G28720.1 Thale cress cytosol 91.23 73.24
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 61.11 61.83
KRG95789 Soybean cytosol, peroxisome, plastid 76.61 61.79
KRH67507 Soybean cytosol, peroxisome, plastid 76.02 61.32
GSMUA_Achr5P20550_001 Banana cytosol, peroxisome, plastid 68.13 61.32
KRH32274 Soybean cytosol 74.85 60.52
KRH19661 Soybean cytosol, endoplasmic reticulum, peroxisome 74.85 60.52
GSMUA_Achr11P... Banana cytosol 61.4 60.17
VIT_07s0005g04800.t01 Wine grape cytosol 74.56 60.14
GSMUA_Achr8P12830_001 Banana cytosol, golgi, peroxisome 63.16 59.5
GSMUA_Achr1P03360_001 Banana peroxisome 59.65 59.3
Solyc06g083700.2.1 Tomato cytosol 71.64 58.89
PGSC0003DMT400051713 Potato cytosol 71.34 58.65
PGSC0003DMT400038139 Potato peroxisome 69.88 58.58
PGSC0003DMT400056644 Potato cytosol, endoplasmic reticulum, peroxisome 71.05 58.55
Solyc09g064160.2.1 Tomato cytosol 71.05 58.55
CDX94734 Canola cytosol, peroxisome, plastid 72.81 58.45
CDY22326 Canola cytosol 72.81 58.45
Solyc06g008050.2.1 Tomato peroxisome 69.88 58.15
CDX89837 Canola cytosol, peroxisome, plastid 71.34 58.1
CDY18209 Canola cytosol, peroxisome, plastid 71.05 57.58
CDY32533 Canola cytosol 70.76 57.35
CDY14900 Canola cytosol 64.91 57.22
GSMUA_Achr4P25050_001 Banana cytosol 63.16 57.14
CDY10073 Canola cytosol, peroxisome, plastid 69.88 56.77
GSMUA_Achr1P24210_001 Banana cytosol 62.87 56.73
GSMUA_Achr11P... Banana cytosol, mitochondrion 62.28 56.5
CDY69333 Canola cytosol 68.71 56.35
GSMUA_Achr2P04250_001 Banana cytosol 61.11 55.15
GSMUA_AchrUn_... Banana mitochondrion 63.16 54.82
TraesCS2A01G011500.1 Wheat plastid 64.33 52.63
Os04t0128900-01 Rice peroxisome 64.33 52.51
CDY17153 Canola peroxisome 66.37 52.06
TraesCS2D01G012100.1 Wheat cytosol, peroxisome, plastid 64.04 52.02
CDY19472 Canola cytosol, peroxisome, plastid 66.08 51.83
TraesCS2B01G010100.2 Wheat cytosol, peroxisome, plastid 63.74 51.78
EES11777 Sorghum cytosol, peroxisome, plastid 63.16 51.18
CDX89807 Canola plastid 65.2 51.15
Zm00001d004467_P001 Maize peroxisome, plasma membrane, plastid 62.87 51.07
CDY61147 Canola plastid 64.91 50.92
CDY53200 Canola golgi, peroxisome, plastid 63.74 50.7
TraesCS2A01G533200.1 Wheat mitochondrion 59.36 48.8
TraesCS2B01G562800.1 Wheat mitochondrion 59.06 48.56
TraesCS2D01G535100.1 Wheat mitochondrion 58.48 48.08
Os07t0437000-01 Rice mitochondrion 55.85 47.99
TraesCSU01G065000.1 Wheat cytosol, endoplasmic reticulum, golgi 30.12 47.25
Zm00001d005439_P001 Maize plastid 54.39 46.73
CDY71529 Canola cytosol, peroxisome 40.64 46.03
HORVU2Hr1G001820.1 Barley plastid 63.16 45.86
CDX87078 Canola extracellular 28.95 45.62
TraesCS4A01G313200.1 Wheat mitochondrion 54.39 45.37
CDX97092 Canola cytosol 54.39 45.26
HORVU5Hr1G125560.2 Barley mitochondrion 54.68 45.17
HORVU5Hr1G050630.3 Barley mitochondrion, plasma membrane 45.61 45.09
CDY71836 Canola plastid 47.08 44.35
CDY39891 Canola plastid 52.92 44.15
CDY23330 Canola plastid 52.63 43.9
KXG35000 Sorghum plastid 54.39 43.76
CDX85720 Canola peroxisome 51.46 42.82
CDX68858 Canola plastid 52.05 42.38
CDX75253 Canola cytosol 51.75 42.34
HORVU2Hr1G116980.1 Barley plastid 59.06 42.26
CDY50808 Canola peroxisome 42.4 42.15
Zm00001d025005_P002 Maize cytosol, peroxisome, plastid 55.26 41.45
CDY54895 Canola cytosol, nucleus, peroxisome 52.92 40.86
CDX80530 Canola cytosol, nucleus, peroxisome 52.63 40.72
CDY19798 Canola cytosol, nucleus, peroxisome 53.22 40.72
CDY62422 Canola cytosol, nucleus, peroxisome 52.34 40.5
CDY05502 Canola cytosol, nucleus, peroxisome 52.34 40.41
PGSC0003DMT400056645 Potato cytosol, peroxisome, plastid 29.24 40.32
TraesCS5B01G566700.1 Wheat golgi, mitochondrion, plasma membrane 54.39 39.57
EES15155 Sorghum peroxisome 49.71 38.37
CDY65511 Canola cytosol 34.8 35.42
CDY50238 Canola cytosol 34.21 35.14
CDX93703 Canola cytosol, extracellular, peroxisome 38.01 33.77
CDY40617 Canola cytosol, extracellular, peroxisome 37.72 33.51
CDX93705 Canola cytosol, extracellular, peroxisome 37.72 33.51
Zm00001d019527_P005 Maize peroxisome 33.33 26.51
Zm00001d005602_P001 Maize endoplasmic reticulum 15.2 25.37
TraesCS7D01G038500.1 Wheat cytosol, nucleus, plasma membrane 49.42 20.74
HORVU7Hr1G007860.1 Barley cytosol 49.12 20.22
OQU88910 Sorghum plastid 12.87 19.38
Protein Annotations
MapMan:11.2.1.1.2Gene3D:3.50.50.60GO:A0A078K1J5UniProt:A0A078K1J5EnsemblPlants:CDY72645ProteinID:CDY72645
ProteinID:CDY72645.1InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOaseInterPro:Flavin_mOase-likeGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0004499GO:GO:0005488GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0050660GO:GO:0050661
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00034185001InterPro:IPR036188PFAM:PF00743PIRSF:PIRSF000332PRINTS:PR00469
PANTHER:PTHR43539PANTHER:PTHR43539:SF2InterPro:Pyridine_nuc-diS_OxRdtase_2SUPFAM:SSF51905TMHMM:TMhelixUniParc:UPI0004EE8583
Description
BnaAnng41850DFlavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A078K1J5]
Coordinates
chrLK052403:-:701..1921
Molecular Weight (calculated)
38349.4 Da
IEP (calculated)
8.937
GRAVY (calculated)
-0.215
Length
342 amino acids
Sequence
(BLAST)
001: MPFPESFPEY PTKRQFIDYL ESYASRFEIN PKFNECVQTA RFDETSGLWR VKTVSNAEST RTEVEYICRW LVVATGENAE RVVPEIDGLN EFTGEVIHAC
101: DYKSGEKFAG KKVLVVGCGN SGMEVSLDLA NHFAKPSMVV RSSVHVMPRE VMGKSTFELA MKMLAWLPLW LVDKILLVLC WLVLGNIEKY GLKRPEMGPM
201: ELKSVKGKTP VLDIGALEKI RSGKIDVVPG VKRFDGNRVE LVNGEQLEVD SVVLATGYRS NVPYWLQESE FFAKNGFPKA ANSGWKGRTG LYAVGFTRRG
301: LSGVSMDAVK IAQDIGSVWK LETKQPTKRS TASHRRCISQ QF
Best Arabidopsis Sequence Match ( AT1G04180.1 )
(BLAST)
001: MENMFRLMAS EEYFSERRCV WVNGPVIVGA GPSGLATAAC LHDQGVPFVV VERSDCIASL WQKRTYDRLK LHLPKKFCQL PKMPFPDHYP EYPTKRQFID
101: YLESYANRFD IKPEFNKSVE SARFDETSGL WRVRTTSDGE EMEYICRWLV VATGENAERV VPEINGLMTE FDGEVIHACE YKSGEKFRGK RVLVVGCGNS
201: GMEVSLDLAN HNAITSMVVR SSVHVLPREI MGKSTFGISV MMMKWLPLWL VDKLLLILSW LVLGSLSNYG LKRPDIGPME LKSMTGKTPV LDIGALEKIK
301: SGDVEIVPAI KQFSRHHVEL VDGQKLDIDA VVLATGYRSN VPSWLQESEF FSKNGFPKSP FPNAWKGKSG LYAAGFTRKG LAGASVDAVN IAQDIGNVWR
401: EETKRQKMRR NVGHRRCISV A
Arabidopsis Description
YUC9Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178WB22]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.