CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 2
peroxisome 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62422	Canola	cytosol, nucleus, peroxisome	98.64	98.64
AT5G25620.2	Thale cress	cytosol	89.37	91.01
CDY54895	Canola	cytosol, nucleus, peroxisome	89.59	89.39
CDY05502	Canola	cytosol, nucleus, peroxisome	89.14	88.94
CDY19798	Canola	cytosol, nucleus, peroxisome	88.69	87.7
CDX87078	Canola	extracellular	42.53	86.64
Solyc08g068160.1.1	Tomato	cytosol	65.38	70.32
VIT_04s0008g03920.t01	Wine grape	cytosol	65.16	69.4
PGSC0003DMT400037628	Potato	cytosol	64.93	68.82
KRH16221	Soybean	cytosol, nucleus, peroxisome	67.65	68.58
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	67.65	68.42
KRH04824	Soybean	cytosol, nucleus, peroxisome	67.19	67.81
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	66.29	66.59
GSMUA_Achr9P05490_001	Banana	cytosol	60.63	64.27
Os05t0528600-01	Rice	extracellular	56.79	61.98
Os01t0732700-01	Rice	cytosol	59.95	59.95
TraesCS3A01G280900.1	Wheat	peroxisome	59.05	59.73
TraesCS3B01G314700.1	Wheat	peroxisome	59.05	59.73
KXG33311	Sorghum	cytosol	58.82	59.63
HORVU3Hr1G069580.2	Barley	cytosol	58.82	59.5
TraesCS3D01G280900.1	Wheat	peroxisome	58.82	59.5
GSMUA_Achr2P19930_001	Banana	cytosol	55.66	59.42
Zm00001d011764_P001	Maize	cytosol	59.28	57.71
CDY14900	Canola	cytosol	50.0	56.96
GSMUA_Achr5P06860_001	Banana	peroxisome	53.85	55.22
CDY32533	Canola	cytosol	52.71	55.21
CDY10073	Canola	cytosol, peroxisome, plastid	52.49	55.11
CDX89837	Canola	cytosol, peroxisome, plastid	52.26	55.0
CDY50808	Canola	peroxisome	42.76	54.94
CDX97092	Canola	cytosol	50.91	54.74
CDY18209	Canola	cytosol, peroxisome, plastid	52.26	54.74
CDY53200	Canola	golgi, peroxisome, plastid	53.17	54.65
CDY14230	Canola	cytosol	48.87	54.41
CDY06876	Canola	cytosol	52.26	54.23
CDY35214	Canola	cytosol	52.26	54.23
CDX94734	Canola	cytosol, peroxisome, plastid	52.04	53.99
CDX85720	Canola	peroxisome	49.77	53.53
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	53.62	53.5
CDY19472	Canola	cytosol, peroxisome, plastid	52.71	53.44
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	47.96	53.4
CDY61147	Canola	plastid	52.49	53.21
CDX89807	Canola	plastid	52.49	53.21
CDY22326	Canola	cytosol	51.13	53.05
CDX97452	Canola	cytosol	51.13	53.05
CDY17153	Canola	peroxisome	52.26	52.98
CDY69333	Canola	cytosol	49.77	52.76
CDY72645	Canola	cytosol	40.72	52.63
CDY71836	Canola	plastid	42.99	52.34
CDY23330	Canola	plastid	46.83	50.49
CDX75253	Canola	cytosol	47.74	50.48
CDY39891	Canola	plastid	46.38	50.0
CDX68858	Canola	plastid	47.29	49.76
CDX93703	Canola	cytosol, extracellular, peroxisome	39.37	45.19
CDY71529	Canola	cytosol, peroxisome	30.77	45.03
CDX93705	Canola	cytosol, extracellular, peroxisome	39.14	44.94
CDY40617	Canola	cytosol, extracellular, peroxisome	39.14	44.94
CDY50238	Canola	cytosol	32.58	43.24
CDY65511	Canola	cytosol	32.81	43.15

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	GO:A0A078CUQ0	EnsemblPlants:CDX80530	ProteinID:CDX80530	ProteinID:CDX80530.1
InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004499
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00133636001	InterPro:IPR036188	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00743	PRINTS:PR00368
PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF13	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51735	SUPFAM:SSF51905
TMHMM:TMhelix	UniParc:UPI0004EE1567	SEG:seg	:	:	:

Description

BnaC07g29140D

Coordinates

chrLK031821:-:1115584..1118444

Molecular Weight (calculated)

49542.3 Da

IEP (calculated)

9.445

GRAVY (calculated)

-0.282

Length

442 amino acids

Sequence
(BLAST)

001: MDWKKEMEGK LANDYLSSNH GMMTSQRRIC VFTGPVIVGA GPSGLATAAC LREKGITSVL LERSNCIASL WQLKTYDRLS LHLPKQFCEL PLKPFPADFP
101: TYPTKQQFIE YLEDYARRFD IRPEFGQTVE SAEFDEKLGM WRVRSVGKEG MTEYVCRWLV AATGENAEPV VPRFEGMEKF AATGVVKHTS HYKTGGDFAG
201: KRVLVVGCGN SGMEVCLDLC NFGAQPSLVV RDAVHVLPRE MLGTSTFGLS MLLLKWLPIR LVDRFLLVVS RFILGDTTLL GLNRPRLGPL ELKNLTGKTP
301: VLDVGTLAKI KTGDIKVCSG IRRLKRHEVE FDNGKKERFD AIILATGYKS NVPSWLKENK MFSKKDGFPI QEFPEGWRGE CGLYAVGFTK RGISGASMDA
401: KRIAQDIYEC SRKSDQAHRH LQCKLGKEKM KMKFSESDRG GN

Best Arabidopsis Sequence Match ( AT5G25620.2 )
(BLAST)

001: MDFCWKREME GKLAHDHRGM TSPRRICVVT GPVIVGAGPS GLATAACLKE RGITSVLLER SNCIASLWQL KTYDRLHLHL PKQFCELPII PFPGDFPTYP
101: TKQQFIEYLE DYARRFDIKP EFNQTVESAA FDENLGMWRV TSVGEEGTTE YVCRWLVAAT GENAEPVVPR FEGMDKFAAA GVVKHTCHYK TGGDFAGKRV
201: LVVGCGNSGM EVCLDLCNFG AQPSLVVRDA VHVLPREMLG TSTFGLSMFL LKWLPIRLVD RFLLVVSRFI LGDTTLLGLN RPRLGPLELK NISGKTPVLD
301: VGTLAKIKTG DIKVCSGIRR LKRHEVEFDN GKTERFDAII LATGYKSNVP SWLKENKMFS KKDGFPIQEF PEGWRGECGL YAVGFTKRGI SGASMDAKRI
401: AEDIHKCWKQ DEQLQCKLGK RMKRKFSESD CGGN

Arabidopsis Description

YUC6Flavin-binding monooxygenase family protein [Source:TAIR;Acc:AT5G25620]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.