Factsheet for AT5G25620.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80530	Canola	cytosol, nucleus, peroxisome	91.01	89.37
CDY62422	Canola	cytosol, nucleus, peroxisome	90.32	88.69
Bra009856.1-P	Field mustard	cytosol, nucleus, peroxisome	86.87	87.27
CDY54895	Canola	cytosol, nucleus, peroxisome	88.02	86.23
CDY05502	Canola	cytosol, nucleus, peroxisome	88.02	86.23
CDY19798	Canola	cytosol, nucleus, peroxisome	88.71	86.13
Bra036547.1-P	Field mustard	cytosol	85.94	84.58
Bra020509.1-P	Field mustard	cytosol	84.33	83.75
CDX87078	Canola	extracellular	41.47	82.95
Solyc08g068160.1.1	Tomato	cytosol	66.59	70.32
VIT_04s0008g03920.t01	Wine grape	cytosol	66.59	69.64
PGSC0003DMT400037628	Potato	cytosol	66.13	68.82
KRH16221	Soybean	cytosol, nucleus, peroxisome	68.66	68.35
KRH04824	Soybean	cytosol, nucleus, peroxisome	67.97	67.35
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	67.74	67.28
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	66.59	65.68
GSMUA_Achr9P05490_001	Banana	cytosol	61.29	63.79
AT4G13260.1	Thale cress	cytosol	59.45	62.17
Os05t0528600-01	Rice	extracellular	56.68	60.74
Os01t0732700-01	Rice	cytosol	60.37	59.28
TraesCS3B01G314700.1	Wheat	peroxisome	59.45	59.04
TraesCS3A01G280900.1	Wheat	peroxisome	59.22	58.81
HORVU3Hr1G069580.2	Barley	cytosol	59.22	58.81
TraesCS3D01G280900.1	Wheat	peroxisome	59.22	58.81
KXG33311	Sorghum	cytosol	58.99	58.72
GSMUA_Achr2P19930_001	Banana	cytosol	55.76	58.45
Zm00001d011764_P001	Maize	cytosol	59.22	56.61
AT5G11320.1	Thale cress	cytosol	53.23	56.2
AT1G04180.1	Thale cress	cytosol	54.15	55.82
AT4G28720.1	Thale cress	cytosol	53.46	54.46
AT2G33230.1	Thale cress	plastid	53.92	54.29
AT5G43890.1	Thale cress	cytosol	52.77	54.01
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	55.07	53.95
AT1G04610.1	Thale cress	cytosol	53.69	53.32
GSMUA_Achr5P06860_001	Banana	peroxisome	52.77	53.13
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	48.16	52.64
AT4G32540.2	Thale cress	cytosol	47.47	49.52
AT1G21430.1	Thale cress	endoplasmic reticulum, extracellular	40.09	44.5
AT1G48910.1	Thale cress	cytosol	39.17	44.39

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	EntrezGene:832638	ProteinID:AED93474.2	ArrayExpress:AT5G25620	EnsemblPlantsGene:AT5G25620
RefSeq:AT5G25620	TAIR:AT5G25620	RefSeq:AT5G25620-TAIR-G	EnsemblPlants:AT5G25620.2	TAIR:AT5G25620.2	UniProt:F4JY69
InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009628	GO:GO:0009819	GO:GO:0009851	GO:GO:0009987	GO:GO:0016491
GO:GO:0047134	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	InterPro:NAD(P)-bd_dom_sf
RefSeq:NP_001190399.2	PFAM:PF00743	PO:PO:0000293	PO:PO:0007611	PO:PO:0009031	PRINTS:PR00368
PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF13	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51735	SUPFAM:SSF51905
UniParc:UPI0008485BEE	Symbol:YUC6	SEG:seg	:	:	:

Description

YUC6Flavin-binding monooxygenase family protein [Source:TAIR;Acc:AT5G25620]

Coordinates

chr5:-:8935040..8938758

Molecular Weight (calculated)

48540.0 Da

IEP (calculated)

8.674

GRAVY (calculated)

-0.216

Length

434 amino acids

Sequence
(BLAST)

001: MDFCWKREME GKLAHDHRGM TSPRRICVVT GPVIVGAGPS GLATAACLKE RGITSVLLER SNCIASLWQL KTYDRLHLHL PKQFCELPII PFPGDFPTYP
101: TKQQFIEYLE DYARRFDIKP EFNQTVESAA FDENLGMWRV TSVGEEGTTE YVCRWLVAAT GENAEPVVPR FEGMDKFAAA GVVKHTCHYK TGGDFAGKRV
201: LVVGCGNSGM EVCLDLCNFG AQPSLVVRDA VHVLPREMLG TSTFGLSMFL LKWLPIRLVD RFLLVVSRFI LGDTTLLGLN RPRLGPLELK NISGKTPVLD
301: VGTLAKIKTG DIKVCSGIRR LKRHEVEFDN GKTERFDAII LATGYKSNVP SWLKENKMFS KKDGFPIQEF PEGWRGECGL YAVGFTKRGI SGASMDAKRI
401: AEDIHKCWKQ DEQLQCKLGK RMKRKFSESD CGGN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.