Factsheet for Solyc08g068160.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037628	Potato	cytosol	93.19	91.85
KRH16221	Soybean	cytosol, nucleus, peroxisome	75.43	71.1
VIT_04s0008g03920.t01	Wine grape	cytosol	71.78	71.08
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	75.18	70.71
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	74.7	69.77
KRH04824	Soybean	cytosol, nucleus, peroxisome	73.72	69.18
Bra009856.1-P	Field mustard	cytosol, nucleus, peroxisome	70.32	66.9
AT5G25620.2	Thale cress	cytosol	70.32	66.59
GSMUA_Achr9P05490_001	Banana	cytosol	67.15	66.19
Bra036547.1-P	Field mustard	cytosol	70.32	65.53
CDY62422	Canola	cytosol, nucleus, peroxisome	70.32	65.38
CDX80530	Canola	cytosol, nucleus, peroxisome	70.32	65.38
CDY05502	Canola	cytosol, nucleus, peroxisome	70.07	65.01
Bra020509.1-P	Field mustard	cytosol	69.1	64.99
CDY54895	Canola	cytosol, nucleus, peroxisome	69.83	64.79
CDX87078	Canola	extracellular	34.06	64.52
CDY19798	Canola	cytosol, nucleus, peroxisome	70.07	64.43
Os05t0528600-01	Rice	extracellular	62.04	62.96
KXG33311	Sorghum	cytosol	65.94	62.16
Os01t0732700-01	Rice	cytosol	66.67	61.99
GSMUA_Achr2P19930_001	Banana	cytosol	62.29	61.84
TraesCS3D01G280900.1	Wheat	peroxisome	64.96	61.1
HORVU3Hr1G069580.2	Barley	cytosol	64.72	60.87
TraesCS3A01G280900.1	Wheat	peroxisome	64.72	60.87
Zm00001d011764_P001	Maize	cytosol	66.91	60.57
TraesCS3B01G314700.1	Wheat	peroxisome	64.23	60.41
Solyc06g008050.2.1	Tomato	peroxisome	58.15	58.15
GSMUA_Achr5P06860_001	Banana	peroxisome	60.83	58.0
Solyc06g065630.2.1	Tomato	cytosol	56.93	57.07
Solyc09g064160.2.1	Tomato	cytosol	57.42	56.87
Solyc06g083700.2.1	Tomato	cytosol	56.69	56.01
Solyc09g091090.1.1	Tomato	peroxisome	58.64	55.92
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	59.85	55.53
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	52.8	54.66
Solyc09g091720.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	42.34	45.67
Solyc09g091870.1.1	Tomato	golgi	39.9	43.04
Solyc09g074430.2.1	Tomato	cytosol	40.39	42.78

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009819
GO:GO:0009851	GO:GO:0009987	GO:GO:0016491	GO:GO:0047134	GO:GO:0050660	GO:GO:0050661
GO:GO:0055114	InterPro:IPR036188	UniProt:K4CM40	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00368
PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF13	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	EnsemblPlantsGene:Solyc08g068160.1
EnsemblPlants:Solyc08g068160.1.1	UniParc:UPI0001C0A8D3	SEG:seg	:	:	:

Description

Indole-3-pyruvate monooxygenase YUCCA6 [Source:Projected from Arabidopsis thaliana (AT5G25620) UniProtKB/Swiss-Prot;Acc:Q8VZ59]

Coordinates

chr8:-:57262619..57265677

Molecular Weight (calculated)

46110.2 Da

IEP (calculated)

8.788

GRAVY (calculated)

-0.126

Length

411 amino acids

Sequence
(BLAST)

001: MDSYLKELQG KTSHDPYFNH HNKMIMNKCV FVNGPVIVGA GPSGLAAAAC LTSKGVQSLV LERSNCIASL WQLKTYDRLS LHLPKQFCEL PLMPFPHDFP
101: TYPTKQQFIK YLESYAITFN IRPLFNQTVV SACYDRNLGL WRIRTDTTTS STEFVTRWLI VATGENAEAV VPDIEGMEEF DGSIMHTSLY KSGEIFKRKK
201: VLVVGCGNSG MEVCLDLCNH HATPSLVVRD TVHVLPREML GKSTFGLSMW LLKWLPMRLV DRFLLITSRL LLGDTSRLGL DRPEIGPLEL KNLSGKTPVL
301: DVGTLAKIKS GDIKVCPGIK RLLKHHTVEF VNGQTEEYDA IILATGYKSN VPSWLKEKEM FSEKDGLPKR PFPNGWKGEC GLYAVGFTKR GLLGASIDAK
401: KIAEHIHQYF Q

Best Arabidopsis Sequence Match ( AT5G25620.1 )
(BLAST)

001: MDFCWKREME GKLAHDHRGM TSPRRICVVT GPVIVGAGPS GLATAACLKE RGITSVLLER SNCIASLWQL KTYDRLHLHL PKQFCELPII PFPGDFPTYP
101: TKQQFIEYLE DYARRFDIKP EFNQTVESAA FDENLGMWRV TSVGEEGTTE YVCRWLVAAT GENAEPVVPR FEGMDKFAAA GVVKHTCHYK TGGDFAGKRV
201: LVVGCGNSGM EVCLDLCNFG AQPSLVVRDA VHVLPREMLG TSTFGLSMFL LKWLPIRLVD RFLLVVSRFI LGDTTLLGLN RPRLGPLELK NISGKTPVLD
301: VGTLAKIKTG DIKVCSGIRR LKRHEVEFDN GKTERFDAII LATGYKSNVP SWLKENKMFS KKDGFPIQEF PEGWRGECGL YAVGFTKRGI SGASMDAKRI
401: AEDIHKCWKQ DEQVKKI

Arabidopsis Description

YUC6Flavin-binding monooxygenase family protein [Source:TAIR;Acc:AT5G25620]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.