Factsheet for Solyc06g008050.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
plastid 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g071920.2.1
Solyc03g005980.2.1
Solyc06g074170.2.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G28720.1	Solyc02g071920.2.1	AT4G19030.1	21798944
AT4G28720.1	Solyc03g005980.2.1	AT4G19030.1	21798944
AT4G28720.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT4G28720.1	Solyc11g068750.1.1	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038139	Potato	peroxisome	95.13	95.83
Solyc09g064160.2.1	Tomato	cytosol	81.51	80.72
Solyc06g083700.2.1	Tomato	cytosol	81.27	80.29
VIT_07s0005g04800.t01	Wine grape	cytosol	76.16	73.82
KRG95789	Soybean	cytosol, peroxisome, plastid	72.51	70.28
CDY14230	Canola	cytosol	67.64	70.03
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	72.02	69.98
CDY72645	Canola	cytosol	58.15	69.88
KRH67507	Soybean	cytosol, peroxisome, plastid	72.02	69.81
CDY14900	Canola	cytosol	65.69	69.59
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	67.4	69.42
KRH32274	Soybean	cytosol	71.29	69.27
Bra011055.1-P	Field mustard	cytosol	71.78	69.25
CDX97452	Canola	cytosol	71.53	69.01
CDY06876	Canola	cytosol	71.53	69.01
CDY35214	Canola	cytosol	71.53	69.01
GSMUA_Achr1P03360_001	Banana	peroxisome	57.66	68.9
GSMUA_Achr11P...	Banana	cytosol	58.39	68.77
AT4G28720.1	Thale cress	cytosol	71.05	68.54
Bra010354.1-P	Field mustard	cytosol	71.05	68.54
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	56.2	68.34
AT1G04180.1	Thale cress	cytosol	69.59	67.93
CDX89837	Canola	cytosol, peroxisome, plastid	68.37	66.9
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	68.37	66.9
CDY18209	Canola	cytosol, peroxisome, plastid	68.61	66.82
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	58.88	66.67
GSMUA_Achr4P25050_001	Banana	cytosol	61.07	66.4
AT5G43890.1	Thale cress	cytosol	68.37	66.27
CDY10073	Canola	cytosol, peroxisome, plastid	67.88	66.27
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	68.61	66.2
CDY32533	Canola	cytosol	67.88	66.11
CDY22326	Canola	cytosol	68.37	65.96
Bra032524.1-P	Field mustard	cytosol	67.64	65.88
CDX94734	Canola	cytosol, peroxisome, plastid	68.13	65.73
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	60.58	65.53
Solyc09g091090.1.1	Tomato	peroxisome	68.13	64.97
CDY69333	Canola	cytosol	65.69	64.75
GSMUA_Achr1P24210_001	Banana	cytosol	58.88	63.85
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	57.42	62.6
GSMUA_Achr2P04250_001	Banana	cytosol	57.66	62.53
TraesCS2A01G011500.1	Wheat	plastid	63.02	61.96
Os04t0128900-01	Rice	peroxisome	63.02	61.81
GSMUA_AchrUn_...	Banana	mitochondrion	59.12	61.68
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	63.02	61.52
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	62.77	61.28
EES11777	Sorghum	cytosol, peroxisome, plastid	62.04	60.43
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	60.83	59.38
Os07t0437000-01	Rice	mitochondrion	56.69	58.54
Solyc08g068160.1.1	Tomato	cytosol	58.15	58.15
TraesCS2B01G562800.1	Wheat	mitochondrion	58.39	57.69
TraesCS2A01G533200.1	Wheat	mitochondrion	58.15	57.45
TraesCS2D01G535100.1	Wheat	mitochondrion	57.91	57.21
Zm00001d005439_P001	Maize	plastid	54.74	56.53
HORVU5Hr1G050630.3	Barley	mitochondrion, plasma membrane	46.23	54.91
HORVU2Hr1G001820.1	Barley	plastid	62.77	54.78
Solyc06g065630.2.1	Tomato	cytosol	54.5	54.63
TraesCS4A01G313200.1	Wheat	mitochondrion	54.5	54.63
KXG35000	Sorghum	plastid	56.2	54.35
HORVU5Hr1G125560.2	Barley	mitochondrion	54.26	53.86
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	56.2	50.66
HORVU2Hr1G116980.1	Barley	plastid	58.15	50.0
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	54.5	47.66
EES15155	Sorghum	peroxisome	51.34	47.63
Zm00001d005602_P001	Maize	endoplasmic reticulum	23.6	47.32
TraesCSU01G065000.1	Wheat	cytosol, endoplasmic reticulum, golgi	24.09	45.41
Solyc09g074430.2.1	Tomato	cytosol	42.58	45.1
Solyc09g091720.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	40.88	44.09
Solyc09g091870.1.1	Tomato	golgi	40.15	43.31
OQU88910	Sorghum	plastid	19.71	35.68
Zm00001d019527_P005	Maize	peroxisome	36.25	34.65
HORVU7Hr1G007860.1	Barley	cytosol	49.15	24.31
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	47.69	24.05

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	ProteinID:ACX33888.1	UniProt:D2IGV3	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase
InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743
PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF2	InterPro:Pyridine_nuc-diS_OxRdtase_2
SUPFAM:SSF51905	EnsemblPlantsGene:Solyc06g008050.2	EnsemblPlants:Solyc06g008050.2.1	TMHMM:TMhelix	UniParc:UPI0001C0A906	:

Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:D2IGV3]

Coordinates

chr6:-:1915865..1918482

Molecular Weight (calculated)

46003.4 Da

IEP (calculated)

9.302

GRAVY (calculated)

-0.061

Length

411 amino acids

Sequence
(BLAST)

001: MASFNDHDLF SSTSRCVWVN GPVIVGAGPS GLAVGACLKE QGIPFVILEK SDCIASLWQK KTYNRLKLHL PKQFCQLPKF PFPQHYPEYP TKKQFIDYLE
101: SYAKRFDINP MFNECVQLAK YDKICKLWRV KTISPNGLEV EYICQWLVVA TGENAEKVVP NIEGLKEFGG EVIHACDYKS GEKFSGKKVV VVGCGNSGME
201: VSLDLCNHNA QTSLVCRSSV HVLPREIFGK SIFELAMLMM KWLPLWLVDK ILLILTWFIL GNIEKYGLKR PKIGPLELKN TQGKTPVLDI GALEKIRSRK
301: INVVPGIKRF SCGTVELVNG EKLEIDSVLL ATGYCSNVPF WLKESEFFSK NGFPKAPFPN SWKGKSGLYA VGFTRRGLSG ASADAIKIAQ DITIAYNEDI
401: MQKKAKKIST L

Best Arabidopsis Sequence Match ( AT4G28720.1 )
(BLAST)

001: MENMFRLMDQ DQDLTNNRCI WVNGPVIVGA GPSGLATAAC LHEQNVPFVV LERADCIASL WQKRTYDRLK LHLPKQFCQL PKMPFPEDFP EYPTKRQFID
101: YLESYATRFE INPKFNECVQ TARFDETSGL WRVKTVSKSE STQTEVEYIC RWLVVATGEN AERVMPEIDG LSEFSGEVIH ACDYKSGEKF AGKKVLVVGC
201: GNSGMEVSLD LANHFAKPSM VVRSSLHVMP REVMGKSTFE LAMKMLRWFP LWLVDKILLV LSWMVLGNIE KYGLKRPEMG PMELKSVKGK TPVLDIGAIE
301: KIRLGKINVV PGIKRFNGNK VELVNGEQLD VDSVVLATGY RSNVPYWLQE NEFFAKNGFP KTVADNNGWK GRTGLYAVGF TRKGLSGASM DAVKIAQDIG
401: SVWQLETKQP TKRSRGSLRR CISQQF

Arabidopsis Description

YUC8Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178V2K9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.