Factsheet for GSMUA_Achr1P03360_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
mitochondrion 3
peroxisome 2
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P10230_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G28720.1	GSMUA_Achr4P10230_001	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	75.58	76.92
GSMUA_Achr11P...	Banana	cytosol	77.33	76.22
GSMUA_Achr4P25050_001	Banana	cytosol	82.27	74.87
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	76.74	72.73
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	77.91	70.53
GSMUA_Achr2P04250_001	Banana	cytosol	69.77	63.32
GSMUA_Achr1P24210_001	Banana	cytosol	67.73	61.48
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	65.99	60.21
CDY72645	Canola	cytosol	59.3	59.65
GSMUA_AchrUn_...	Banana	mitochondrion	67.15	58.63
VIT_07s0005g04800.t01	Wine grape	cytosol	71.8	58.25
Solyc06g008050.2.1	Tomato	peroxisome	68.9	57.66
PGSC0003DMT400038139	Potato	peroxisome	67.73	57.11
Os04t0128900-01	Rice	peroxisome	69.48	57.04
KRG95789	Soybean	cytosol, peroxisome, plastid	70.06	56.84
CDY14230	Canola	cytosol	65.41	56.68
KRH67507	Soybean	cytosol, peroxisome, plastid	69.77	56.6
Solyc06g083700.2.1	Tomato	cytosol	67.73	56.01
EES11777	Sorghum	cytosol, peroxisome, plastid	68.6	55.92
KRH32274	Soybean	cytosol	68.6	55.79
PGSC0003DMT400051713	Potato	cytosol	67.44	55.77
Solyc09g064160.2.1	Tomato	cytosol	67.15	55.66
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	64.53	55.64
CDY18209	Canola	cytosol, peroxisome, plastid	68.02	55.45
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	66.86	55.42
CDY14900	Canola	cytosol	62.5	55.41
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	68.02	55.32
PGSC0003DMT400030255	Potato	cytosol	67.15	55.13
KRH33524	Soybean	cytosol, peroxisome, plastid	70.35	54.88
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	67.15	54.87
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	66.86	54.76
CDX89837	Canola	cytosol, peroxisome, plastid	66.86	54.76
TraesCS2B01G562800.1	Wheat	mitochondrion	65.99	54.57
TraesCS2A01G011500.1	Wheat	plastid	66.28	54.55
Os07t0437000-01	Rice	mitochondrion	63.08	54.52
AT5G43890.1	Thale cress	cytosol	67.15	54.48
KRG90286	Soybean	cytosol, peroxisome, plastid	69.48	54.44
VIT_05s0051g00060.t01	Wine grape	peroxisome, plastid	69.19	54.34
TraesCS2A01G533200.1	Wheat	mitochondrion	65.7	54.33
Bra032499.1-P	Field mustard	cytosol	66.57	54.27
GSMUA_AchrUn_...	Banana	peroxisome	54.07	54.23
CDY10073	Canola	cytosol, peroxisome, plastid	66.28	54.16
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	66.28	54.16
TraesCS2D01G535100.1	Wheat	mitochondrion	65.41	54.09
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	65.99	53.92
Bra011055.1-P	Field mustard	cytosol	66.57	53.76
CDY06876	Canola	cytosol	66.57	53.76
CDY35214	Canola	cytosol	66.57	53.76
AT1G04180.1	Thale cress	cytosol	65.7	53.68
CDY32533	Canola	cytosol	65.7	53.55
Bra032524.1-P	Field mustard	cytosol	65.41	53.32
Bra010354.1-P	Field mustard	cytosol	65.99	53.29
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	65.99	53.29
CDX94734	Canola	cytosol, peroxisome, plastid	65.99	53.29
CDY22326	Canola	cytosol	65.7	53.05
CDY53200	Canola	golgi, peroxisome, plastid	66.28	53.02
AT2G33230.1	Thale cress	plastid	66.28	52.9
Solyc09g091090.1.1	Tomato	peroxisome	66.28	52.9
CDX97452	Canola	cytosol	65.41	52.82
CDY69333	Canola	cytosol	63.95	52.76
Bra015334.1-P	Field mustard	plastid	66.57	52.52
CDX89807	Canola	plastid	66.57	52.52
CDY61147	Canola	plastid	66.57	52.52
Zm00001d005439_P001	Maize	plastid	60.76	52.51
AT4G28720.1	Thale cress	cytosol	64.83	52.35
AT1G04610.1	Thale cress	cytosol	65.99	51.95
TraesCS4A01G313200.1	Wheat	mitochondrion	61.63	51.71
Bra005513.1-P	Field mustard	cytosol, peroxisome, plastid	65.12	51.38
CDY17153	Canola	peroxisome	65.12	51.38
CDY19472	Canola	cytosol, peroxisome, plastid	65.12	51.38
KXG35000	Sorghum	plastid	63.37	51.29
GSMUA_Achr1P05290_001	Banana	peroxisome	52.91	51.12
GSMUA_Achr4P14020_001	Banana	extracellular, plasma membrane	52.91	51.12
HORVU5Hr1G050630.3	Barley	mitochondrion, plasma membrane	51.16	50.87
HORVU5Hr1G125560.2	Barley	mitochondrion	61.05	50.72
TraesCSU01G065000.1	Wheat	cytosol, endoplasmic reticulum, golgi	31.98	50.46
HORVU2Hr1G001820.1	Barley	plastid	65.7	47.98
GSMUA_Achr4P03480_001	Banana	extracellular	50.29	47.14
HORVU2Hr1G116980.1	Barley	plastid	65.41	47.07
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	33.43	46.37
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	61.34	46.27
GSMUA_Achr2P19930_001	Banana	cytosol	54.94	45.65
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	52.62	45.59
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	61.92	45.32
GSMUA_Achr5P06860_001	Banana	peroxisome	56.69	45.24
GSMUA_Achr9P05490_001	Banana	cytosol	52.91	43.65
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	55.52	43.12
GSMUA_Achr4P03000_001	Banana	mitochondrion	46.51	42.55
EES15155	Sorghum	peroxisome	54.65	42.44
GSMUA_Achr3P08830_001	Banana	cytosol, peroxisome, plastid	41.28	41.64
GSMUA_Achr9P17710_001	Banana	endoplasmic reticulum	42.15	40.17
GSMUA_Achr4P14860_001	Banana	peroxisome, plastid	46.51	39.9
GSMUA_Achr8P00130_001	Banana	plasma membrane	40.99	39.72
GSMUA_Achr6P17640_001	Banana	plastid	35.47	37.65
GSMUA_Achr3P10910_001	Banana	endoplasmic reticulum, golgi, vacuole	34.88	35.71
GSMUA_Achr3P10900_001	Banana	cytosol, peroxisome, plasma membrane	29.65	31.78
Zm00001d019527_P005	Maize	peroxisome	37.5	30.0
Zm00001d005602_P001	Maize	endoplasmic reticulum	17.15	28.78
OQU88910	Sorghum	plastid	16.57	25.11
HORVU7Hr1G007860.1	Barley	cytosol	52.91	21.9
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	51.45	21.72

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G03360_001	EnsemblPlants:GSMUA_Achr1P03360_001
EnsemblPlants:GSMUA_Achr1T03360_001	InterPro:IPR036188	UniProt:M0RWP4	PFAM:PF00743	PANTHER:PTHR43539	PANTHER:PTHR43539:SF2
SUPFAM:SSF51905	UniParc:UPI00029651EF	SEG:seg	:	:	:

Description

flavin monooxygenase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G03360_001]

Coordinates

chr1:+:2760370..2761795

Molecular Weight (calculated)

37593.5 Da

IEP (calculated)

8.102

GRAVY (calculated)

-0.027

Length

344 amino acids

Sequence
(BLAST)

001: MAGVADRAES LSRLCVWVNG PIIVGAGPSG LAVGACLREQ GEFPEFPTRK QFISYLESYA KQFEISPRFN QSVEYIGRWL VAATGENAEK VVPELEGLEE
101: FGGDVKHVCD YKSGEAYRGK RVLVVGCGNS GMEVSLDLCD HDASPSMVVR DSVHVLPREV LGKSTFELAV LLMKWLPLWL ADRILVVLAW LVFGNVEKLG
201: LKRPSTGPLE LKNTQGRTPV LDIGALGKIR SGEIKVVPGI KRFIQGKVEL VDGQLLDVDS VILATGYRSN VPRWLRGSDF FFSKDGLPKS PFPNGWKGSY
301: GLYAAGFTRR GLSGAAADAV RIADDIGRLW KEESEPAKKL ICLP

Best Arabidopsis Sequence Match ( AT1G04180.1 )
(BLAST)

001: MENMFRLMAS EEYFSERRCV WVNGPVIVGA GPSGLATAAC LHDQGVPFVV VERSDCIASL WQKRTYDRLK LHLPKKFCQL PKMPFPDHYP EYPTKRQFID
101: YLESYANRFD IKPEFNKSVE SARFDETSGL WRVRTTSDGE EMEYICRWLV VATGENAERV VPEINGLMTE FDGEVIHACE YKSGEKFRGK RVLVVGCGNS
201: GMEVSLDLAN HNAITSMVVR SSVHVLPREI MGKSTFGISV MMMKWLPLWL VDKLLLILSW LVLGSLSNYG LKRPDIGPME LKSMTGKTPV LDIGALEKIK
301: SGDVEIVPAI KQFSRHHVEL VDGQKLDIDA VVLATGYRSN VPSWLQESEF FSKNGFPKSP FPNAWKGKSG LYAAGFTRKG LAGASVDAVN IAQDIGNVWR
401: EETKRQKMRR NVGHRRCISV A

Arabidopsis Description

YUC9Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178WB22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.