Factsheet for GSMUA_AchrUn_randomP04200_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P10230_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G28720.1	GSMUA_Achr4P10230_001	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P24210_001	Banana	cytosol	78.93	82.06
GSMUA_Achr2P04250_001	Banana	cytosol	72.84	75.73
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	71.83	75.07
GSMUA_Achr11P...	Banana	cytosol	63.2	71.35
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	60.15	70.12
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	63.2	68.59
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	65.99	68.42
GSMUA_Achr1P03360_001	Banana	peroxisome	58.63	67.15
GSMUA_Achr4P25050_001	Banana	cytosol	63.96	66.67
CDY72645	Canola	cytosol	54.82	63.16
VIT_07s0005g04800.t01	Wine grape	cytosol	67.77	62.97
PGSC0003DMT400051713	Potato	cytosol	64.97	61.54
KRH33524	Soybean	cytosol, peroxisome, plastid	68.27	61.0
KRH67507	Soybean	cytosol, peroxisome, plastid	65.48	60.85
Solyc06g083700.2.1	Tomato	cytosol	64.21	60.82
Solyc09g064160.2.1	Tomato	cytosol	63.96	60.72
KRG95789	Soybean	cytosol, peroxisome, plastid	65.23	60.61
KRG90286	Soybean	cytosol, peroxisome, plastid	67.51	60.59
KRH32274	Soybean	cytosol	64.97	60.52
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	63.71	60.48
Bra032499.1-P	Field mustard	cytosol	64.72	60.43
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	64.72	60.28
PGSC0003DMT400038139	Potato	peroxisome	62.18	60.05
AT2G33230.1	Thale cress	plastid	65.23	59.63
CDY61147	Canola	plastid	65.48	59.17
Solyc06g008050.2.1	Tomato	peroxisome	61.68	59.12
Bra015334.1-P	Field mustard	plastid	65.23	58.95
CDX89807	Canola	plastid	65.23	58.95
Bra011055.1-P	Field mustard	cytosol	63.71	58.92
CDY35214	Canola	cytosol	63.71	58.92
AT1G04610.1	Thale cress	cytosol	65.23	58.81
PGSC0003DMT400030255	Potato	cytosol	62.44	58.71
CDY06876	Canola	cytosol	63.45	58.69
CDY19472	Canola	cytosol, peroxisome, plastid	64.72	58.49
Bra005513.1-P	Field mustard	cytosol, peroxisome, plastid	64.47	58.26
AT5G43890.1	Thale cress	cytosol	62.69	58.25
CDY18209	Canola	cytosol, peroxisome, plastid	62.18	58.06
CDY17153	Canola	peroxisome	64.21	58.03
CDY14900	Canola	cytosol	57.11	57.99
CDY14230	Canola	cytosol	58.38	57.93
CDY53200	Canola	golgi, peroxisome, plastid	63.2	57.91
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	58.63	57.89
TraesCS2A01G011500.1	Wheat	plastid	61.17	57.66
CDY32533	Canola	cytosol	61.68	57.58
Os04t0128900-01	Rice	peroxisome	61.17	57.52
AT1G04180.1	Thale cress	cytosol	61.42	57.48
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	61.17	57.38
CDX89837	Canola	cytosol, peroxisome, plastid	61.17	57.38
Bra032524.1-P	Field mustard	cytosol	61.42	57.35
Bra010354.1-P	Field mustard	cytosol	61.93	57.28
CDX97452	Canola	cytosol	61.68	57.04
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	60.91	57.01
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	60.91	57.01
EES11777	Sorghum	cytosol, peroxisome, plastid	60.91	56.87
Solyc09g091090.1.1	Tomato	peroxisome	62.18	56.84
AT4G28720.1	Thale cress	cytosol	61.42	56.81
CDX94734	Canola	cytosol, peroxisome, plastid	61.42	56.81
CDY10073	Canola	cytosol, peroxisome, plastid	60.66	56.77
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	61.17	56.57
VIT_05s0051g00060.t01	Wine grape	peroxisome, plastid	62.69	56.39
CDY69333	Canola	cytosol	59.64	56.35
CDY22326	Canola	cytosol	60.91	56.34
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	59.64	55.82
Os07t0437000-01	Rice	mitochondrion	55.08	54.52
GSMUA_Achr4P14020_001	Banana	extracellular, plasma membrane	49.24	54.49
TraesCS2B01G562800.1	Wheat	mitochondrion	56.85	53.85
HORVU5Hr1G050630.3	Barley	mitochondrion, plasma membrane	46.95	53.47
GSMUA_AchrUn_...	Banana	peroxisome	46.45	53.35
TraesCS2A01G533200.1	Wheat	mitochondrion	56.09	53.12
TraesCS2D01G535100.1	Wheat	mitochondrion	56.09	53.12
TraesCS4A01G313200.1	Wheat	mitochondrion	54.57	52.44
HORVU5Hr1G125560.2	Barley	mitochondrion	55.08	52.42
Zm00001d005439_P001	Maize	plastid	52.79	52.26
GSMUA_Achr1P05290_001	Banana	peroxisome	47.21	52.25
HORVU2Hr1G001820.1	Barley	plastid	61.17	51.17
GSMUA_Achr4P03480_001	Banana	extracellular	47.46	50.95
TraesCSU01G065000.1	Wheat	cytosol, endoplasmic reticulum, golgi	28.17	50.92
KXG35000	Sorghum	plastid	54.31	50.35
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	31.47	50.0
GSMUA_Achr9P05490_001	Banana	cytosol	52.54	49.64
GSMUA_Achr2P19930_001	Banana	cytosol	52.03	49.52
GSMUA_Achr5P06860_001	Banana	peroxisome	52.28	47.8
GSMUA_Achr4P03000_001	Banana	mitochondrion	44.92	47.07
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	46.95	46.6
HORVU2Hr1G116980.1	Barley	plastid	56.35	46.44
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	52.03	46.28
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	54.57	45.74
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	51.78	44.74
GSMUA_Achr4P14860_001	Banana	peroxisome, plastid	45.18	44.39
EES15155	Sorghum	peroxisome	49.24	43.79
GSMUA_Achr9P17710_001	Banana	endoplasmic reticulum	39.59	43.21
GSMUA_Achr8P00130_001	Banana	plasma membrane	38.32	42.54
GSMUA_Achr3P08830_001	Banana	cytosol, peroxisome, plastid	36.55	42.23
GSMUA_Achr3P10910_001	Banana	endoplasmic reticulum, golgi, vacuole	32.99	38.69
Zm00001d005602_P001	Maize	endoplasmic reticulum	19.8	38.05
GSMUA_Achr6P17640_001	Banana	plastid	29.7	36.11
GSMUA_Achr3P10900_001	Banana	cytosol, peroxisome, plasma membrane	27.92	34.27
Zm00001d019527_P005	Maize	peroxisome	33.25	30.47
OQU88910	Sorghum	plastid	14.47	25.11
HORVU7Hr1G007860.1	Barley	cytosol	49.24	23.35
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	48.22	23.31

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG04200_001	EnsemblPlants:GSMUA_AchrUn_randomP04200_001
EnsemblPlants:GSMUA_AchrUn_randomT04200_001	InterPro:IPR036188	UniProt:M0U682	PFAM:PF00743	PRINTS:PR00469	PANTHER:PTHR43539
PANTHER:PTHR43539:SF2	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI000295D889	:	:

Description

Putative Uncharacterized oxidoreductase czcO-like [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04200_001]

Coordinates

chrchrUn_random:-:17941675..17943255

Molecular Weight (calculated)

43711.0 Da

IEP (calculated)

8.850

GRAVY (calculated)

-0.155

Length

394 amino acids

Sequence
(BLAST)

001: MAQMSGHREI LKRRCRLVNG PLIVGAGPSG LALGACLKEL GVPFFCQLPK LPFPDDFPEY PTRNQFIGYL ESYAAHFELS PRFNETVQSA KYDDTCGMWR
101: VRTTASGPET ANRSAEVEYI CQWLAVSTGE NAEPVIPEME GLRKFGGQVI HASDYRSGET YQGKRVLVVG CGNSGMEVCL DLCHHKSFPV MAVRDSVHVL
201: PREIFRKSTF ELAVFLMKWF PVKVVDKILL ALSRMILGNT ERYGLKRPSL GPLELKHMQG KTPVLDIGAL RKIKSGDIKV VPGVKGFLHG SVELVDGRVI
301: DVDSVILATG YCSNVPSWLQ DTDLFNKDGF PKQPFPSGWK GKSGLYAVGF TRRGLSGASH DAVQVAEDIS RVWKEETRQA KHIVACHRRC ISQI

Best Arabidopsis Sequence Match ( AT1G04610.1 )
(BLAST)

001: MYGNNNKKSI NITSMFQNLI PEGSDIFSRR CIWVNGPVIV GAGPSGLAVA AGLKREGVPF IILERANCIA SLWQNRTYDR LKLHLPKQFC QLPNYPFPDE
101: FPEYPTKFQF IQYLESYAAN FDINPKFNET VQSAKYDETF GLWRVKTISN MGQLGSCEFE YICRWIVVAT GENAEKVVPD FEGLEDFGGD VLHAGDYKSG
201: GRYQGKKVLV VGCGNSGMEV SLDLYNHGAN PSMVVRSAVH VLPREIFGKS TFELGVTMMK YMPVWLADKT ILFLARIILG NTDKYGLKRP KIGPLELKNK
301: EGKTPVLDIG ALPKIRSGKI KIVPGIIKFG KGKVELIDGR VLEIDSVILA TGYRSNVPSW LKDNDFFSDD GIPKNPFPNG WKGEAGLYAV GFTRKGLFGA
401: SLDAMSVAHD IANRWKEESK QQKKTAAARH RRCISHF

Arabidopsis Description

YUC3Probable indole-3-pyruvate monooxygenase YUCCA3 [Source:UniProtKB/Swiss-Prot;Acc:O23024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.