Factsheet for Solyc06g083700.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 1
plastid 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g071920.2.1
Solyc03g005980.2.1
Solyc06g074170.2.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G28720.1	Solyc02g071920.2.1	AT4G19030.1	21798944
AT4G28720.1	Solyc03g005980.2.1	AT4G19030.1	21798944
AT4G28720.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT4G28720.1	Solyc11g068750.1.1	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400051713	Potato	cytosol	97.84	97.84
Solyc09g064160.2.1	Tomato	cytosol	85.82	86.02
Solyc06g008050.2.1	Tomato	peroxisome	80.29	81.27
VIT_07s0005g04800.t01	Wine grape	cytosol	75.72	74.29
CDY14230	Canola	cytosol	69.47	72.8
KRH67507	Soybean	cytosol, peroxisome, plastid	74.04	72.64
CDY14900	Canola	cytosol	67.55	72.42
KRG95789	Soybean	cytosol, peroxisome, plastid	73.8	72.41
Bra011055.1-P	Field mustard	cytosol	74.04	72.3
CDY35214	Canola	cytosol	74.04	72.3
CDY06876	Canola	cytosol	74.04	72.3
CDY18209	Canola	cytosol, peroxisome, plastid	73.08	72.04
AT1G04180.1	Thale cress	cytosol	72.84	71.97
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	68.99	71.93
CDX89837	Canola	cytosol, peroxisome, plastid	72.6	71.9
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	72.6	71.9
CDY72645	Canola	cytosol	58.89	71.64
CDX97452	Canola	cytosol	73.32	71.6
Bra010354.1-P	Field mustard	cytosol	73.32	71.6
AT5G43890.1	Thale cress	cytosol	72.6	71.23
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	71.88	70.69
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	72.36	70.66
KRH32274	Soybean	cytosol	71.63	70.45
AT4G28720.1	Thale cress	cytosol	72.12	70.42
CDY22326	Canola	cytosol	72.12	70.42
CDY32533	Canola	cytosol	71.39	70.38
Bra032524.1-P	Field mustard	cytosol	71.15	70.14
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	56.97	70.12
CDY10073	Canola	cytosol, peroxisome, plastid	70.91	70.07
CDX94734	Canola	cytosol, peroxisome, plastid	71.63	69.95
GSMUA_Achr11P...	Banana	cytosol	58.17	69.34
CDY69333	Canola	cytosol	68.99	68.82
GSMUA_Achr1P03360_001	Banana	peroxisome	56.01	67.73
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	58.89	67.49
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	60.58	66.32
GSMUA_Achr1P24210_001	Banana	cytosol	60.34	66.23
GSMUA_Achr4P25050_001	Banana	cytosol	59.38	65.34
Solyc09g091090.1.1	Tomato	peroxisome	67.55	65.2
TraesCS2A01G011500.1	Wheat	plastid	64.9	64.59
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	65.14	64.37
GSMUA_AchrUn_...	Banana	mitochondrion	60.82	64.21
Os04t0128900-01	Rice	peroxisome	64.66	64.2
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	64.9	64.13
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	57.21	63.13
EES11777	Sorghum	cytosol, peroxisome, plastid	63.7	62.8
GSMUA_Achr2P04250_001	Banana	cytosol	56.97	62.53
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	62.26	61.52
Zm00001d005439_P001	Maize	plastid	55.53	58.04
Os07t0437000-01	Rice	mitochondrion	55.29	57.79
HORVU2Hr1G001820.1	Barley	plastid	65.38	57.75
TraesCS2B01G562800.1	Wheat	mitochondrion	57.45	57.45
TraesCS2A01G533200.1	Wheat	mitochondrion	57.45	57.45
TraesCS2D01G535100.1	Wheat	mitochondrion	56.97	56.97
HORVU5Hr1G050630.3	Barley	mitochondrion, plasma membrane	47.36	56.94
Solyc08g068160.1.1	Tomato	cytosol	56.01	56.69
TraesCS4A01G313200.1	Wheat	mitochondrion	55.29	56.1
HORVU5Hr1G125560.2	Barley	mitochondrion	55.77	56.04
KXG35000	Sorghum	plastid	55.05	53.88
Solyc06g065630.2.1	Tomato	cytosol	52.88	53.66
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	57.21	52.19
Zm00001d005602_P001	Maize	endoplasmic reticulum	25.24	51.22
HORVU2Hr1G116980.1	Barley	plastid	57.69	50.21
EES15155	Sorghum	peroxisome	52.64	49.44
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	55.29	48.94
TraesCSU01G065000.1	Wheat	cytosol, endoplasmic reticulum, golgi	24.28	46.33
Solyc09g091720.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	40.87	44.62
Solyc09g091870.1.1	Tomato	golgi	39.9	43.57
Solyc09g074430.2.1	Tomato	cytosol	40.62	43.56
OQU88910	Sorghum	plastid	21.39	39.21
Zm00001d019527_P005	Maize	peroxisome	36.78	35.58
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	50.96	26.01
HORVU7Hr1G007860.1	Barley	cytosol	50.48	25.27

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	ProteinID:ACX33889.1	UniProt:D2IGV4	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase
InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743
PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF2	InterPro:Pyridine_nuc-diS_OxRdtase_2
SUPFAM:SSF51905	EnsemblPlantsGene:Solyc06g083700.2	EnsemblPlants:Solyc06g083700.2.1	TMHMM:TMhelix	UniParc:UPI0001C0A907	SEG:seg

Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:D2IGV4]

Coordinates

chr6:-:49034280..49036049

Molecular Weight (calculated)

46461.4 Da

IEP (calculated)

9.094

GRAVY (calculated)

-0.167

Length

416 amino acids

Sequence
(BLAST)

001: MFTFSSEQDS VSRRCVWVNG PVIVGAGPSG LAVGACLREQ GVPFVVIERS DCIASLWQKR TYDRLKLHLP KKFCQLPKFP FPNHFPEYPT KRQFIEYLEL
101: YAKHFDINPQ FNECVQSAKY DETCGVWRVK TSSPNGFEVE YISQWLVVAT GENAERVVPE IEGLKEFGGE VIHACDYKSG KNYKGKKVVV VGCGNSGMEV
201: SLDLSNHGAQ PSIVCRSSVH VLPREICGKS TFELAMLMMK WLPLWLVDKI LLILAWFILG NIENYGLKRP SIGPLELKNK HGKTPVLDIG ALEKIRSGKV
301: KVVPGIKKFS CGTVELVTGE KLEIDSVVLA TGYCSNVPYW LQESEFFSNN GFPKAQIPNN WKGKSGLYAI GFTRKGLAGA SADAINIAQD IGKVYKEDLK
401: QKKQKVPTHR RCISTF

Best Arabidopsis Sequence Match ( AT4G28720.1 )
(BLAST)

001: MENMFRLMDQ DQDLTNNRCI WVNGPVIVGA GPSGLATAAC LHEQNVPFVV LERADCIASL WQKRTYDRLK LHLPKQFCQL PKMPFPEDFP EYPTKRQFID
101: YLESYATRFE INPKFNECVQ TARFDETSGL WRVKTVSKSE STQTEVEYIC RWLVVATGEN AERVMPEIDG LSEFSGEVIH ACDYKSGEKF AGKKVLVVGC
201: GNSGMEVSLD LANHFAKPSM VVRSSLHVMP REVMGKSTFE LAMKMLRWFP LWLVDKILLV LSWMVLGNIE KYGLKRPEMG PMELKSVKGK TPVLDIGAIE
301: KIRLGKINVV PGIKRFNGNK VELVNGEQLD VDSVVLATGY RSNVPYWLQE NEFFAKNGFP KTVADNNGWK GRTGLYAVGF TRKGLSGASM DAVKIAQDIG
401: SVWQLETKQP TKRSRGSLRR CISQQF

Arabidopsis Description

YUC8Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178V2K9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.