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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • cytosol 1
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G28720.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G011500.1 Wheat plastid 86.41 97.37
TraesCS2D01G012100.1 Wheat cytosol, peroxisome, plastid 86.84 97.15
TraesCS2B01G010100.2 Wheat cytosol, peroxisome, plastid 85.99 96.2
Os04t0128900-01 Rice peroxisome 71.55 80.43
EES11777 Sorghum cytosol, peroxisome, plastid 71.55 79.86
Zm00001d004467_P001 Maize peroxisome, plasma membrane, plastid 70.49 78.86
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 50.96 71.01
GSMUA_Achr11P... Banana cytosol 51.38 69.34
HORVU2Hr1G116980.1 Barley plastid 69.64 68.62
GSMUA_Achr5P20550_001 Banana cytosol, peroxisome, plastid 54.99 68.16
GSMUA_Achr8P12830_001 Banana cytosol, golgi, peroxisome 52.02 67.49
VIT_07s0005g04800.t01 Wine grape cytosol 60.3 66.98
Solyc09g064160.2.1 Tomato cytosol 58.81 66.75
CDX89837 Canola cytosol, peroxisome, plastid 59.45 66.67
Bra015293.1-P Field mustard cytosol, peroxisome, plastid 59.45 66.67
CDY18209 Canola cytosol, peroxisome, plastid 59.66 66.59
KRG95789 Soybean cytosol, peroxisome, plastid 59.87 66.51
CDY10073 Canola cytosol, peroxisome, plastid 59.45 66.51
GSMUA_Achr4P25050_001 Banana cytosol 53.29 66.4
CDY14900 Canola cytosol 54.56 66.24
CDY32533 Canola cytosol 59.24 66.11
AT1G04180.1 Thale cress cytosol 59.02 66.03
PGSC0003DMT400056644 Potato cytosol, endoplasmic reticulum, peroxisome 58.17 66.02
Bra033703.1-P Field mustard cytosol, peroxisome, plastid 59.66 65.96
Bra032524.1-P Field mustard cytosol 59.02 65.88
KRH67507 Soybean cytosol, peroxisome, plastid 59.24 65.8
GSMUA_Achr1P03360_001 Banana peroxisome 47.98 65.7
Bra036002.1-P Field mustard cytosol, peroxisome, plastid 55.63 65.66
CDY22326 Canola cytosol 59.24 65.49
CDX94734 Canola cytosol, peroxisome, plastid 59.24 65.49
Solyc06g083700.2.1 Tomato cytosol 57.75 65.38
AT5G43890.1 Thale cress cytosol 58.81 65.33
PGSC0003DMT400051713 Potato cytosol 57.54 65.14
KRH19661 Soybean cytosol, endoplasmic reticulum, peroxisome 58.17 64.78
KRH32274 Soybean cytosol 57.96 64.54
CDY14230 Canola cytosol 54.14 64.23
CDY69333 Canola cytosol 56.69 64.03
CDY35214 Canola cytosol 57.54 63.62
CDX97452 Canola cytosol 57.54 63.62
Bra011055.1-P Field mustard cytosol 57.54 63.62
CDY06876 Canola cytosol 57.32 63.38
PGSC0003DMT400038139 Potato peroxisome 54.78 63.24
CDY72645 Canola cytosol 45.86 63.16
Zm00001d025005_P002 Maize cytosol, peroxisome, plastid 61.15 63.16
Bra010354.1-P Field mustard cytosol 57.11 63.15
AT4G28720.1 Thale cress cytosol 57.11 63.15
HORVU5Hr1G050630.3 Barley mitochondrion, plasma membrane 46.28 63.01
Solyc06g008050.2.1 Tomato peroxisome 54.78 62.77
GSMUA_Achr2P04250_001 Banana cytosol 50.32 62.53
PGSC0003DMT400056645 Potato cytosol, peroxisome, plastid 32.91 62.5
Bra032499.1-P Field mustard cytosol 55.63 62.09
GSMUA_Achr1P24210_001 Banana cytosol 49.47 61.48
GSMUA_AchrUn_... Banana mitochondrion 51.17 61.17
AT1G04610.1 Thale cress cytosol 56.69 61.1
Bra015334.1-P Field mustard plastid 56.26 60.78
CDX89807 Canola plastid 56.26 60.78
HORVU5Hr1G125560.2 Barley mitochondrion 53.29 60.63
KRG90286 Soybean cytosol, peroxisome, plastid 56.48 60.59
CDY61147 Canola plastid 56.05 60.55
KRH33524 Soybean cytosol, peroxisome, plastid 56.69 60.54
GSMUA_Achr11P... Banana cytosol, mitochondrion 48.41 60.48
CDY53200 Canola golgi, peroxisome, plastid 55.2 60.47
AT2G33230.1 Thale cress plastid 54.78 59.86
Bra005513.1-P Field mustard cytosol, peroxisome, plastid 55.2 59.63
CDY19472 Canola cytosol, peroxisome, plastid 54.99 59.4
CDY17153 Canola peroxisome 54.56 58.95
PGSC0003DMT400030255 Potato cytosol 51.8 58.23
VIT_05s0051g00060.t01 Wine grape peroxisome, plastid 54.14 58.22
Zm00001d005602_P001 Maize endoplasmic reticulum 24.84 57.07
Solyc09g091090.1.1 Tomato peroxisome 51.59 56.38
HORVU5Hr1G028100.1 Barley golgi, mitochondrion, peroxisome 40.76 54.08
HORVU3Hr1G069580.2 Barley cytosol 48.2 51.95
HORVU3Hr1G057950.1 Barley cytosol 44.59 51.72
HORVU4Hr1G073700.1 Barley cytosol 45.01 51.08
HORVU7Hr1G017620.2 Barley plasma membrane 37.37 45.48
HORVU7Hr1G023900.1 Barley endoplasmic reticulum, extracellular, plastid 19.32 45.27
HORVU3Hr1G030390.2 Barley cytosol 42.04 44.7
HORVU1Hr1G022530.34 Barley extracellular 34.61 42.67
HORVU1Hr1G078200.2 Barley endoplasmic reticulum, extracellular 33.97 42.22
HORVU7Hr1G017680.1 Barley extracellular 34.18 42.15
HORVU0Hr1G031640.2 Barley plasma membrane 33.97 41.88
HORVU0Hr1G001150.2 Barley plasma membrane 33.97 41.88
HORVU1Hr1G067720.2 Barley plasma membrane 33.97 41.88
HORVU1Hr1G022670.1 Barley extracellular 33.76 41.62
HORVU7Hr1G013170.3 Barley cytosol 35.03 41.35
HORVU0Hr1G000290.1 Barley extracellular 29.09 40.9
HORVU7Hr1G023910.1 Barley endoplasmic reticulum, extracellular, plastid 33.12 40.84
HORVU7Hr1G017660.1 Barley extracellular 33.33 40.78
HORVU7Hr1G017630.2 Barley extracellular 32.7 40.1
HORVU6Hr1G019210.2 Barley cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 31.85 39.27
HORVU7Hr1G007860.1 Barley cytosol 55.41 31.41
Protein Annotations
MapMan:11.2.1.1.2Gene3D:3.50.50.60UniProt:A0A287GWF9InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOaseInterPro:Flavin_mOase-like
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0004499GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0050660GO:GO:0050661GO:GO:0055114
EnsemblPlantsGene:HORVU2Hr1G001820EnsemblPlants:HORVU2Hr1G001820.1InterPro:IPR036188PFAM:PF00743PIRSF:PIRSF000332PRINTS:PR00368
PRINTS:PR00469PANTHER:PTHR43539PANTHER:PTHR43539:SF2InterPro:Pyridine_nuc-diS_OxRdtase_2SUPFAM:SSF51905UniParc:UPI000B466F53
Description
Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A287GWF9]
Coordinates
chrchr2H:-:3757576..3759427
Molecular Weight (calculated)
51797.1 Da
IEP (calculated)
9.673
GRAVY (calculated)
-0.203
Length
471 amino acids
Sequence
(BLAST)
001: NTQHISNSSR QQQQPTNTFF NLSIFTTFPS LNRSHSRPAA TKAKARNPSS MVLLSSDRMD SLFSPRCVWV NGPIIIGAGP SGLAVGASLR EQGVPYVMLE
101: REDCIASLWQ KRTYDRLKLH LPKQFCQLPR MPFPADYPEY PTRRQFIDYL EDYAAAFHVK PEFGSTVQSA RYDETSGLWR VHSSSAKSGE MEYIGRWLVV
201: ATGENAENVV PDIPGLDGFA GEVAHVSEYK SGDKYKGKRV LVVGCGNSGM EVSLDLCDHG ALPSMVVRDA VHVLPREVMG KSTFELATLL MAWLPLWFVD
301: KVMVFLSWLI LGNLAGFGIR RPAIGPLTLK NKYGKTPVLD TGALAKIRSG DITVVPGVSR FTKSRAELSD GTALDLDAVV MATGYRSNVP QWLQGTDFFG
401: KDGYPTTGFP NGWKGKSGLY SVGFTRRGLS GASADAVRIA KDLGQVWREE TKPTTKRAAG ACHRRCISVI F
Best Arabidopsis Sequence Match ( AT5G43890.1 )
(BLAST)
001: MENMFRLMGS EDSSDRRRCI WVNGPVIVGA GPSGLATAAC LREEGVPFVV LERADCIASL WQKRTYDRIK LHLPKKVCQL PKMPFPEDYP EYPTKRQFIE
101: YLESYANKFE ITPQFNECVQ SARYDETSGL WRIKTTSSSS SGSEMEYICR WLVVATGENA EKVVPEIDGL TTEFEGEVIH SCEYKSGEKY RGKSVLVVGC
201: GNSGMEVSLD LANHNANASM VVRSSVHVLP REILGKSSFE ISMMLMKWFP LWLVDKILLI LAWLILGNLT KYGLKRPTMG PMELKIVSGK TPVLDIGAME
301: KIKSGEVEIV PGIKRFSRSH VELVDGQRLD LDAVVLATGY RSNVPSWLQE NDLFSKNGFP KSPFPNAWKG KSGLYAAGFT RKGLAGASAD AVNIAQDIGN
401: VWREETKRQK MRTRVGHRRC ISVA
Arabidopsis Description
YUC5Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178UK83]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.