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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • peroxisome 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plastid, secretory
iPSORT:secretory
MultiLoc:peroxisome
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G031640.2 Barley plasma membrane 99.21 99.21
HORVU0Hr1G001150.2 Barley plasma membrane 99.21 99.21
TraesCS5D01G556600.1 Wheat plasma membrane 85.34 85.34
TraesCS5B01G538300.1 Wheat extracellular 84.29 84.29
TraesCS6B01G033700.1 Wheat plasma membrane 70.94 83.64
TraesCS4A01G325400.3 Wheat extracellular 84.03 83.59
HORVU1Hr1G078200.2 Barley endoplasmic reticulum, extracellular 81.15 81.79
HORVU7Hr1G023900.1 Barley endoplasmic reticulum, extracellular, plastid 40.31 76.62
HORVU7Hr1G017680.1 Barley extracellular 75.65 75.65
HORVU7Hr1G017660.1 Barley extracellular 76.18 75.58
HORVU1Hr1G022530.34 Barley extracellular 75.39 75.39
HORVU7Hr1G023910.1 Barley endoplasmic reticulum, extracellular, plastid 74.08 74.08
HORVU1Hr1G022670.1 Barley extracellular 73.82 73.82
HORVU7Hr1G017630.2 Barley extracellular 73.82 73.44
HORVU0Hr1G000290.1 Barley extracellular 63.61 72.54
HORVU6Hr1G019210.2 Barley cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 70.42 70.42
Os11t0207700-00 Rice endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 65.97 65.12
Os11t0207900-00 Rice endoplasmic reticulum 64.66 63.82
EES08388 Sorghum extracellular 59.69 63.16
EES08387 Sorghum extracellular, plasma membrane 62.04 63.03
Os02t0272200-00 Rice extracellular 60.21 59.9
HORVU7Hr1G017620.2 Barley plasma membrane 59.95 59.17
VIT_18s0001g15100.t01 Wine grape cytosol, peroxisome, plasma membrane 56.02 56.46
GSMUA_Achr3P10910_001 Banana endoplasmic reticulum, golgi, vacuole 48.69 55.36
KRH64052 Soybean vacuole 54.45 54.59
VIT_18s0001g15190.t01 Wine grape cytosol 53.93 54.35
KRH53890 Soybean cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 53.66 53.81
Bra018763.1-P Field mustard cytosol, extracellular, peroxisome 35.08 52.55
Bra017913.1-P Field mustard cytosol 51.57 52.12
CDY65511 Canola cytosol 45.81 52.08
GSMUA_Achr3P10900_001 Banana cytosol, peroxisome, plasma membrane 43.72 52.02
CDY50238 Canola cytosol 45.29 51.95
AT1G48910.1 Thale cress cytosol 51.83 51.7
AT1G21430.1 Thale cress endoplasmic reticulum, extracellular 52.62 51.41
Bra018761.1-P Field mustard cytosol, extracellular, peroxisome 29.32 51.14
CDY40617 Canola cytosol, extracellular, peroxisome 51.31 50.91
CDX93705 Canola cytosol, extracellular, peroxisome 51.31 50.91
CDX93703 Canola cytosol, extracellular, peroxisome 51.31 50.91
PGSC0003DMT400090184 Potato cytosol 30.63 50.87
KRH53357 Soybean extracellular 51.83 49.5
PGSC0003DMT400097007 Potato cytosol, peroxisome, plastid 50.0 49.48
PGSC0003DMT400088054 Potato cytosol 39.53 48.24
PGSC0003DMT400092778 Potato extracellular, peroxisome, plasma membrane 41.88 48.05
Solyc09g091870.1.1 Tomato golgi 47.64 47.77
PGSC0003DMT400094923 Potato extracellular 47.64 47.77
Solyc09g091720.1.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 47.12 47.24
KRH64572 Soybean cytosol, endoplasmic reticulum, peroxisome 52.09 45.85
HORVU7Hr1G013170.3 Barley cytosol 45.29 43.36
PGSC0003DMT400085760 Potato cytosol, nucleus, peroxisome 26.96 42.74
HORVU3Hr1G069580.2 Barley cytosol 45.55 39.82
HORVU3Hr1G057950.1 Barley cytosol 41.36 38.92
HORVU4Hr1G073700.1 Barley cytosol 41.88 38.55
HORVU5Hr1G050630.3 Barley mitochondrion, plasma membrane 34.29 37.86
HORVU3Hr1G030390.2 Barley cytosol 43.46 37.47
Zm00001d000445_P001 Maize plasma membrane 62.57 37.4
HORVU5Hr1G125560.2 Barley mitochondrion 40.31 37.2
HORVU5Hr1G028100.1 Barley golgi, mitochondrion, peroxisome 33.51 36.06
HORVU2Hr1G116980.1 Barley plastid 43.19 34.52
HORVU2Hr1G001820.1 Barley plastid 41.88 33.97
Zm00001d049077_P001 Maize endoplasmic reticulum, plasma membrane 62.57 30.29
HORVU7Hr1G007860.1 Barley cytosol 37.7 17.33
Protein Annotations
MapMan:11.2.1.1.2Gene3D:3.50.50.60UniProt:A0A287G270InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOaseGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004499GO:GO:0005488GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0050660GO:GO:0050661GO:GO:0055114EnsemblPlantsGene:HORVU1Hr1G067720EnsemblPlants:HORVU1Hr1G067720.2
InterPro:IPR036188PFAM:PF13738PIRSF:PIRSF000332PRINTS:PR00368PRINTS:PR00469PANTHER:PTHR43539
PANTHER:PTHR43539:SF9InterPro:Pyridine_nuc-diS_OxRdtase_2SUPFAM:SSF51905UniParc:UPI000B488DEC::
Description
No Description!
Coordinates
chrchr1H:-:478760762..478762188
Molecular Weight (calculated)
42019.9 Da
IEP (calculated)
8.007
GRAVY (calculated)
-0.060
Length
382 amino acids
Sequence
(BLAST)
001: MEDVVVLIVG AGPAGLATAA CLNQFSIPYV IVERENCSAS LWRNRTYDRL KLHLAREFCE LPHMPYSVDT PTYIPKKTFI KYLDDYIECF NIRPRYFTVV
101: ESSTYDIGGK CWSIMARDMA KCATVNYRAK FLVVASGENS VENIPVIPGL ENFPGEAIHS SGYKSGINYS GRNVLVIGSG NSGMEIAYDL ASHGANTSIV
201: IRSPIHVMTK ELIRLGMTLI HYLPPKMVDH IVLMMANFIF GDLSRHGITR PNKGPFVLKM GSGRSAVIDV GTVGLIKEGK IKVHGRITKI KGETIEFQGG
301: KEDSFDDIVF ATGYKSTANM WLKSGEDMLN SEGLPTKEFP NHWKGENGLY CAGLARRGLA GITIDAKNIA NDINCNIDSM SG
Best Arabidopsis Sequence Match ( AT1G21430.1 )
(BLAST)
001: MEKEIKILVL IIGAGPAGLA TSACLNRLNI PNIVVERDVC SASLWKRRSY DRLKLHLAKQ FCQLPHMPFP SNTPTFVSKL GFINYLDEYA TRFNVNPRYN
101: RNVKSAYFKD GQWIVKVVNK TTALIEVYSA KFMVAATGEN GEGVIPEIPG LVESFQGKYL HSSEYKNGEK FAGKDVLVVG CGNSGMEIAY DLSKCNANVS
201: IVVRSQVHVL TRCIVRIGMS LLRFFPVKLV DRLCLLLAEL RFRNTSRYGL VRPNNGPFLN KLITGRSATI DVGCVGEIKS GKIQVVTSIK RIEGKTVEFI
301: DGNTKNVDSI VFATGYKSSV SKWLEVDDGD LFNENGMPKR EFPDHWKGKN GLYSAGFGKQ GLAGISRDAR NIARDIDSLV CGRSSKNKLS K
Arabidopsis Description
YUC11Probable indole-3-pyruvate monooxygenase YUCCA11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPL3]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.