Factsheet for PGSC0003DMT400088054

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400090184	Potato	cytosol	64.54	87.83
Solyc09g091870.1.1	Tomato	golgi	87.54	71.92
PGSC0003DMT400085760	Potato	cytosol, nucleus, peroxisome	54.95	71.37
PGSC0003DMT400094923	Potato	extracellular	86.26	70.87
PGSC0003DMT400097007	Potato	cytosol, peroxisome, plastid	81.15	65.8
PGSC0003DMT400092778	Potato	extracellular, peroxisome, plasma membrane	67.73	63.66
TraesCS7D01G071900.1	Wheat	cytosol	32.27	47.87
TraesCS2D01G565900.1	Wheat	cytosol, nucleus, peroxisome	47.28	46.4
KRH64052	Soybean	vacuole	52.08	42.78
KRH53890	Soybean	cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	51.44	42.26
EES08388	Sorghum	extracellular	48.24	41.83
GSMUA_Achr6P17640_001	Banana	plastid	43.13	41.67
EES08387	Sorghum	extracellular, plasma membrane	49.84	41.49
TraesCS2B01G596000.1	Wheat	endoplasmic reticulum, plastid	48.24	39.53
TraesCS2A01G587200.1	Wheat	extracellular	48.24	39.53
TraesCS2B01G595800.1	Wheat	endoplasmic reticulum, plastid	48.24	39.53
HORVU1Hr1G067720.2	Barley	plasma membrane	48.24	39.53
HORVU0Hr1G001150.2	Barley	plasma membrane	48.24	39.53
HORVU0Hr1G031640.2	Barley	plasma membrane	48.24	39.53
TraesCS2B01G596100.1	Wheat	extracellular	47.92	39.27
TraesCS2D01G566100.1	Wheat	plasma membrane	47.92	39.27
TraesCS2B01G595700.1	Wheat	endoplasmic reticulum, plastid	47.92	39.27
Os11t0207900-00	Rice	endoplasmic reticulum	48.24	39.02
TraesCS2A01G587500.1	Wheat	extracellular, plastid	47.6	39.01
TraesCS5B01G538300.1	Wheat	extracellular	47.6	39.01
Os11t0207700-00	Rice	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	47.92	38.76
TraesCS2A01G587400.1	Wheat	extracellular	47.28	38.74
TraesCS2B01G601800.1	Wheat	extracellular	47.28	38.74
CDX93705	Canola	cytosol, extracellular, peroxisome	47.6	38.7
OQU78863	Sorghum	extracellular	47.28	38.54
TraesCS4A01G325400.3	Wheat	extracellular	47.28	38.54
TraesCS2B01G600600.1	Wheat	extracellular	46.96	38.48
TraesCS7A01G076200.1	Wheat	extracellular	46.96	38.48
TraesCSU01G186300.1	Wheat	endoplasmic reticulum, plastid	39.94	38.46
CDY40617	Canola	cytosol, extracellular, peroxisome	47.28	38.44
TraesCS7A01G076300.1	Wheat	endoplasmic reticulum, extracellular	46.65	38.22
TraesCS5D01G556600.1	Wheat	plasma membrane	46.65	38.22
HORVU1Hr1G022530.34	Barley	extracellular	46.65	38.22
TraesCS7D01G071800.1	Wheat	extracellular, plastid	46.65	38.22
CDX93703	Canola	cytosol, extracellular, peroxisome	46.96	38.18
AT1G48910.1	Thale cress	cytosol	46.65	38.12
TraesCS7D01G072000.1	Wheat	endoplasmic reticulum, extracellular	46.33	37.96
TraesCSU01G038800.1	Wheat	endoplasmic reticulum, extracellular, plastid	39.3	37.85
Zm00001d023718_P002	Maize	extracellular, vacuole	48.24	37.84
HORVU1Hr1G022670.1	Barley	extracellular	46.01	37.7
TraesCS7D01G071500.1	Wheat	extracellular, plastid	46.01	37.7
HORVU7Hr1G017680.1	Barley	extracellular	46.01	37.7
TraesCS7B01G004700.1	Wheat	extracellular	46.01	37.7
HORVU7Hr1G017660.1	Barley	extracellular	46.33	37.66
TraesCS6B01G033700.1	Wheat	plasma membrane	38.98	37.65
TraesCS7A01G459600.1	Wheat	extracellular	45.37	37.57
TraesCS4A01G374300.1	Wheat	extracellular, plastid	45.69	37.43
TraesCS4A01G374200.1	Wheat	extracellular, plastid	45.69	37.43
TraesCS2B01G596200.1	Wheat	plastid	45.69	37.43
TraesCS7D01G071400.1	Wheat	extracellular	45.69	37.43
HORVU1Hr1G078200.2	Barley	endoplasmic reticulum, extracellular	45.05	37.2
GSMUA_Achr3P10910_001	Banana	endoplasmic reticulum, golgi, vacuole	39.94	37.2
HORVU6Hr1G019210.2	Barley	cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	45.37	37.17
TraesCS4A01G379900.1	Wheat	extracellular	45.37	37.17
HORVU7Hr1G023910.1	Barley	endoplasmic reticulum, extracellular, plastid	45.37	37.17
TraesCS7A01G075400.1	Wheat	plasma membrane	45.37	37.08
TraesCS7D01G070900.1	Wheat	extracellular, plasma membrane	45.37	37.08
Os02t0272200-00	Rice	extracellular	45.37	36.98
TraesCS4A01G374500.1	Wheat	extracellular, plastid	45.05	36.91
TraesCS4A01G373500.1	Wheat	plasma membrane	45.05	36.81
TraesCS2A01G587300.1	Wheat	extracellular, plastid	33.87	36.81
HORVU7Hr1G017630.2	Barley	extracellular	45.05	36.72
TraesCS2A01G587600.1	Wheat	extracellular	33.87	36.55
HORVU7Hr1G017620.2	Barley	plasma membrane	44.41	35.92
HORVU0Hr1G000290.1	Barley	extracellular	38.34	35.82
TraesCS2D01G566200.1	Wheat	plasma membrane, plastid	32.59	35.42
TraesCS2B01G595900.1	Wheat	endoplasmic reticulum, extracellular, plastid	32.91	35.15
TraesCS2D01G565800.1	Wheat	endoplasmic reticulum	29.39	34.98
Bra018763.1-P	Field mustard	cytosol, extracellular, peroxisome	28.43	34.9
GSMUA_Achr3P10900_001	Banana	cytosol, peroxisome, plasma membrane	35.78	34.89
Os12t0189500-00	Rice	peroxisome, plasma membrane, plastid	45.69	34.13
TraesCS4A01G380000.1	Wheat	extracellular	35.78	33.63
TraesCS4A01G374400.1	Wheat	extracellular	27.48	33.2
Bra018761.1-P	Field mustard	cytosol, extracellular, peroxisome	23.0	32.88
HORVU7Hr1G023900.1	Barley	endoplasmic reticulum, extracellular, plastid	21.09	32.84
TraesCS7A01G076000.1	Wheat	endoplasmic reticulum, extracellular	26.84	32.81
TraesCS7A01G076100.1	Wheat	endoplasmic reticulum, extracellular, plastid	21.73	32.54
PGSC0003DMT400038139	Potato	peroxisome	42.17	32.35
PGSC0003DMT400067103	Potato	cytosol	34.5	32.34
PGSC0003DMT400037628	Potato	cytosol	42.81	32.13
PGSC0003DMT400051713	Potato	cytosol	42.17	31.73
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	40.58	30.6
PGSC0003DMT400030255	Potato	cytosol	40.89	30.55
Zm00001d000445_P001	Maize	plasma membrane	50.16	24.57
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	19.17	24.19
TraesCS2D01G566000.1	Wheat	plastid	47.6	20.38
Zm00001d049077_P001	Maize	endoplasmic reticulum, plasma membrane	50.48	20.03

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	ncoils:Coil	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114
InterPro:IPR036188	UniProt:M1DF47	PFAM:PF00743	EnsemblPlantsGene:PGSC0003DMG400037625	PGSC:PGSC0003DMG400037625	EnsemblPlants:PGSC0003DMT400088054
PIRSF:PIRSF000332	PRINTS:PR00370	PANTHER:PTHR43539	PANTHER:PTHR43539:SF12	SUPFAM:SSF51905	UniParc:UPI0002960C85

Description

Flavin-containing monooxygenase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400037625]

Coordinates

chr9:-:58782559..58787726

Molecular Weight (calculated)

34695.7 Da

IEP (calculated)

6.800

GRAVY (calculated)

-0.112

Length

313 amino acids

Sequence
(BLAST)

001: MPHTTSTPKY LSKKEFIQYL DKYVEHFNIK PKYQTCVELA FFNSEEGKWN VKSRDLASGD LEVYACNFLI LATGENNEGY IPKVVGIENF EGEIIHSSDY
101: KSGQKYEGKN VLVVGSGNSG MEIAFDLSNY GSHVSVVVRS PIHVLTREMV YTAMLMLKYL PVSLVDTVIA KYAKFKFGNL AELGIPQPEE GPFSVKISKG
201: RSPVIDVGAI DKIKLGQIKV LPGISEIKEQ AVVFDNGDEH QFDAIIFATG YKNVATKWLK DYSSIFLEDG TLINWKGENG LYAAGFSKRG IAGISMDAIA
301: IAYNIKTVRG DKI

Best Arabidopsis Sequence Match ( AT1G21430.1 )
(BLAST)

001: MEKEIKILVL IIGAGPAGLA TSACLNRLNI PNIVVERDVC SASLWKRRSY DRLKLHLAKQ FCQLPHMPFP SNTPTFVSKL GFINYLDEYA TRFNVNPRYN
101: RNVKSAYFKD GQWIVKVVNK TTALIEVYSA KFMVAATGEN GEGVIPEIPG LVESFQGKYL HSSEYKNGEK FAGKDVLVVG CGNSGMEIAY DLSKCNANVS
201: IVVRSQVHVL TRCIVRIGMS LLRFFPVKLV DRLCLLLAEL RFRNTSRYGL VRPNNGPFLN KLITGRSATI DVGCVGEIKS GKIQVVTSIK RIEGKTVEFI
301: DGNTKNVDSI VFATGYKSSV SKWLEVDDGD LFNENGMPKR EFPDHWKGKN GLYSAGFGKQ GLAGISRDAR NIARDIDSLV CGRSSKNKLS K

Arabidopsis Description

YUC11Probable indole-3-pyruvate monooxygenase YUCCA11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPL3]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.