Skip to main content
crop-pal logo
Potato
Search for another protein from :
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • peroxisome 1
  • nucleus 1
  • mitochondrion 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:secretory
MultiLoc:peroxisome
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400015077
PGSC0003DMT400050482
PGSC0003DMT400071510
PGSC0003DMT400073246

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G28720.1 PGSC0003DMT400071510 AT4G19030.1 21798944
AT4G28720.1 PGSC0003DMT400073246 AT4G19030.1 21798944
AT4G28720.1 PGSC0003DMT400015077 AT5G22290.1 21798944
AT4G28720.1 PGSC0003DMT400050482 AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g064160.2.1 Tomato cytosol 77.02 46.02
PGSC0003DMT400056644 Potato cytosol, endoplasmic reticulum, peroxisome 75.81 45.3
PGSC0003DMT400051713 Potato cytosol 70.56 42.07
PGSC0003DMT400038139 Potato peroxisome 68.15 41.42
VIT_07s0005g04800.t01 Wine grape cytosol 68.55 40.09
Zm00001d005602_P001 Maize endoplasmic reticulum 32.26 39.02
CDY14900 Canola cytosol 60.89 38.92
CDY14230 Canola cytosol 62.1 38.79
Bra036002.1-P Field mustard cytosol, peroxisome, plastid 60.89 37.84
KRG95789 Soybean cytosol, peroxisome, plastid 63.31 37.03
KRH19661 Soybean cytosol, endoplasmic reticulum, peroxisome 62.9 36.88
PGSC0003DMT400067103 Potato cytosol 49.6 36.83
KRH67507 Soybean cytosol, peroxisome, plastid 62.9 36.79
Bra015293.1-P Field mustard cytosol, peroxisome, plastid 62.1 36.67
CDX89837 Canola cytosol, peroxisome, plastid 62.1 36.67
TraesCS2A01G011500.1 Wheat plastid 61.69 36.6
AT1G04180.1 Thale cress cytosol 62.1 36.58
CDY18209 Canola cytosol, peroxisome, plastid 62.1 36.49
KRH32274 Soybean cytosol 62.1 36.41
Bra010354.1-P Field mustard cytosol 62.5 36.38
CDY35214 Canola cytosol 62.5 36.38
Bra011055.1-P Field mustard cytosol 62.5 36.38
CDY06876 Canola cytosol 62.5 36.38
CDX97452 Canola cytosol 62.1 36.15
TraesCS2D01G012100.1 Wheat cytosol, peroxisome, plastid 61.29 36.1
TraesCS2B01G010100.2 Wheat cytosol, peroxisome, plastid 61.29 36.1
CDY10073 Canola cytosol, peroxisome, plastid 61.29 36.1
AT5G43890.1 Thale cress cytosol 61.69 36.08
PGSC0003DMT400030255 Potato cytosol 60.89 36.04
CDY69333 Canola cytosol 60.48 35.97
CDY32533 Canola cytosol 60.89 35.78
Bra032524.1-P Field mustard cytosol 60.48 35.55
AT4G28720.1 Thale cress cytosol 60.89 35.45
Bra033703.1-P Field mustard cytosol, peroxisome, plastid 60.89 35.45
CDY22326 Canola cytosol 60.89 35.45
CDX94734 Canola cytosol, peroxisome, plastid 60.48 35.21
Os04t0128900-01 Rice peroxisome 58.87 34.84
EES11777 Sorghum cytosol, peroxisome, plastid 59.27 34.83
Zm00001d004467_P001 Maize peroxisome, plasma membrane, plastid 58.87 34.68
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 47.18 34.62
Zm00001d005439_P001 Maize plastid 54.44 33.92
GSMUA_Achr8P12830_001 Banana cytosol, golgi, peroxisome 49.6 33.88
HORVU5Hr1G050630.3 Barley mitochondrion, plasma membrane 47.18 33.81
TraesCS2A01G533200.1 Wheat mitochondrion 56.45 33.65
TraesCS2B01G562800.1 Wheat mitochondrion 56.45 33.65
GSMUA_Achr1P03360_001 Banana peroxisome 46.37 33.43
Os07t0437000-01 Rice mitochondrion 53.63 33.42
TraesCS2D01G535100.1 Wheat mitochondrion 56.05 33.41
HORVU2Hr1G001820.1 Barley plastid 62.5 32.91
GSMUA_Achr11P... Banana cytosol 45.97 32.66
PGSC0003DMT400037628 Potato cytosol 54.44 32.37
HORVU5Hr1G125560.2 Barley mitochondrion 52.82 31.64
KXG35000 Sorghum plastid 54.03 31.53
GSMUA_AchrUn_... Banana mitochondrion 50.0 31.47
TraesCS4A01G313200.1 Wheat mitochondrion 52.02 31.46
GSMUA_Achr4P25050_001 Banana cytosol 47.18 30.95
GSMUA_Achr1P24210_001 Banana cytosol 47.18 30.87
GSMUA_Achr5P20550_001 Banana cytosol, peroxisome, plastid 47.18 30.79
OQU88910 Sorghum plastid 27.42 29.96
GSMUA_Achr2P04250_001 Banana cytosol 45.56 29.82
Zm00001d025005_P002 Maize cytosol, peroxisome, plastid 54.44 29.61
HORVU2Hr1G116980.1 Barley plastid 56.45 29.29
CDY72645 Canola cytosol 40.32 29.24
GSMUA_Achr11P... Banana cytosol, mitochondrion 43.55 28.65
EES15155 Sorghum peroxisome 50.81 28.44
TraesCS5B01G566700.1 Wheat golgi, mitochondrion, plasma membrane 52.82 27.87
Zm00001d019527_P005 Maize peroxisome 42.74 24.65
PGSC0003DMT400094923 Potato extracellular 37.5 24.41
PGSC0003DMT400092778 Potato extracellular, peroxisome, plasma membrane 32.26 24.02
TraesCSU01G065000.1 Wheat cytosol, endoplasmic reticulum, golgi 20.16 22.94
PGSC0003DMT400097007 Potato cytosol, peroxisome, plastid 35.48 22.8
PGSC0003DMT400090184 Potato cytosol 19.35 20.87
PGSC0003DMT400088054 Potato cytosol 24.19 19.17
PGSC0003DMT400085760 Potato cytosol, nucleus, peroxisome 14.92 15.35
TraesCS7D01G038500.1 Wheat cytosol, nucleus, plasma membrane 45.16 13.74
HORVU7Hr1G007860.1 Barley cytosol 43.95 13.12
Protein Annotations
EntrezGene:102581759MapMan:11.2.1.1.2Gene3D:3.50.50.60InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOase-likeGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0004499GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0050660GO:GO:0050661GO:GO:0055114InterPro:IPR036188
UniProt:M1BZQ4PFAM:PF00743EnsemblPlantsGene:PGSC0003DMG400022026PGSC:PGSC0003DMG400022026EnsemblPlants:PGSC0003DMT400056645PANTHER:PTHR43539
PANTHER:PTHR43539:SF2SUPFAM:SSF51905UniParc:UPI000295F039RefSeq:XP_006350285.1::
Description
Monooxygenase [Source:PGSC_GENE;Acc:PGSC0003DMG400022026]
Coordinates
chr9:-:45700489..45701676
Molecular Weight (calculated)
28065.8 Da
IEP (calculated)
9.476
GRAVY (calculated)
-0.333
Length
248 amino acids
Sequence
(BLAST)
001: MSSFSDKDRC VWVNGPVIVG ADPSGLTVGA CLKEQGVPCV RLERSDCIAS LWQQRTYDRL KLHLPKQFCQ LPKFPFPEHY PEYPSKRQFI EYLQSYATQF
101: QVVVVGCGYS GMEVSLALCN HDTQPSMACR SAVHVLAREI FGKSTFEHTQ GKIPVLDIGA LEKIRSGKVK VFPGINKFSC EFESVVGYYS NAPYWLKESE
201: LKDYPKAQYP NKWKGKCRVG FEKRRLAAGA SAFIRKGQNS AHRISFKF
Best Arabidopsis Sequence Match ( AT1G04180.1 )
(BLAST)
001: MENMFRLMAS EEYFSERRCV WVNGPVIVGA GPSGLATAAC LHDQGVPFVV VERSDCIASL WQKRTYDRLK LHLPKKFCQL PKMPFPDHYP EYPTKRQFID
101: YLESYANRFD IKPEFNKSVE SARFDETSGL WRVRTTSDGE EMEYICRWLV VATGENAERV VPEINGLMTE FDGEVIHACE YKSGEKFRGK RVLVVGCGNS
201: GMEVSLDLAN HNAITSMVVR SSVHVLPREI MGKSTFGISV MMMKWLPLWL VDKLLLILSW LVLGSLSNYG LKRPDIGPME LKSMTGKTPV LDIGALEKIK
301: SGDVEIVPAI KQFSRHHVEL VDGQKLDIDA VVLATGYRSN VPSWLQESEF FSKNGFPKSP FPNAWKGKSG LYAAGFTRKG LAGASVDAVN IAQDIGNVWR
401: EETKRQKMRR NVGHRRCISV A
Arabidopsis Description
YUC9Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178WB22]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.