Factsheet for GSMUA_Achr4P25050_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P10230_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G28720.1	GSMUA_Achr4P10230_001	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P03360_001	Banana	peroxisome	74.87	82.27
GSMUA_Achr11P...	Banana	cytosol	73.81	79.94
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	71.43	79.88
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	78.57	78.16
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	72.49	75.48
GSMUA_Achr2P04250_001	Banana	cytosol	67.99	67.81
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	65.61	65.78
GSMUA_Achr1P24210_001	Banana	cytosol	65.87	65.7
GSMUA_AchrUn_...	Banana	mitochondrion	66.67	63.96
CDY72645	Canola	cytosol	57.14	63.16
KRG95789	Soybean	cytosol, peroxisome, plastid	69.05	61.56
KRH67507	Soybean	cytosol, peroxisome, plastid	68.78	61.32
VIT_07s0005g04800.t01	Wine grape	cytosol	68.78	61.32
EES11777	Sorghum	cytosol, peroxisome, plastid	68.25	61.14
Solyc06g008050.2.1	Tomato	peroxisome	66.4	61.07
Solyc09g064160.2.1	Tomato	cytosol	66.93	60.96
Os04t0128900-01	Rice	peroxisome	67.46	60.86
PGSC0003DMT400038139	Potato	peroxisome	65.61	60.78
KRH32274	Soybean	cytosol	67.99	60.76
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	67.72	60.52
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	67.2	60.33
TraesCS2A01G011500.1	Wheat	plastid	66.67	60.29
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	65.87	60.0
CDY14900	Canola	cytosol	61.38	59.79
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	62.96	59.65
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	66.4	59.62
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	66.14	59.38
Solyc06g083700.2.1	Tomato	cytosol	65.34	59.38
PGSC0003DMT400051713	Potato	cytosol	65.08	59.13
Os07t0437000-01	Rice	mitochondrion	62.17	59.05
CDY18209	Canola	cytosol, peroxisome, plastid	65.34	58.53
KRH33524	Soybean	cytosol, peroxisome, plastid	68.25	58.5
CDY10073	Canola	cytosol, peroxisome, plastid	65.08	58.43
KRG90286	Soybean	cytosol, peroxisome, plastid	67.72	58.31
Bra032499.1-P	Field mustard	cytosol	65.08	58.29
CDY32533	Canola	cytosol	65.08	58.29
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	64.55	58.1
CDX89837	Canola	cytosol, peroxisome, plastid	64.55	58.1
Bra032524.1-P	Field mustard	cytosol	64.81	58.06
AT5G43890.1	Thale cress	cytosol	65.08	58.02
PGSC0003DMT400030255	Potato	cytosol	64.29	58.0
AT1G04180.1	Thale cress	cytosol	64.29	57.72
CDY14230	Canola	cytosol	60.58	57.68
AT2G33230.1	Thale cress	plastid	65.61	57.54
VIT_05s0051g00060.t01	Wine grape	peroxisome, plastid	66.67	57.53
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	64.81	57.51
CDX94734	Canola	cytosol, peroxisome, plastid	64.81	57.51
CDY69333	Canola	cytosol	63.23	57.31
Zm00001d005439_P001	Maize	plastid	60.32	57.29
CDY22326	Canola	cytosol	64.55	57.28
AT4G28720.1	Thale cress	cytosol	64.29	57.04
Bra011055.1-P	Field mustard	cytosol	64.02	56.81
CDY06876	Canola	cytosol	64.02	56.81
CDY35214	Canola	cytosol	64.02	56.81
TraesCS2B01G562800.1	Wheat	mitochondrion	62.43	56.73
CDY53200	Canola	golgi, peroxisome, plastid	64.29	56.51
TraesCS2A01G533200.1	Wheat	mitochondrion	62.17	56.49
Bra010354.1-P	Field mustard	cytosol	63.49	56.34
CDX97452	Canola	cytosol	63.49	56.34
TraesCS2D01G535100.1	Wheat	mitochondrion	61.9	56.25
Bra015334.1-P	Field mustard	plastid	64.81	56.19
CDX89807	Canola	plastid	64.81	56.19
CDY61147	Canola	plastid	64.81	56.19
Solyc09g091090.1.1	Tomato	peroxisome	64.02	56.15
KXG35000	Sorghum	plastid	62.43	55.53
CDY19472	Canola	cytosol, peroxisome, plastid	63.76	55.28
Bra005513.1-P	Field mustard	cytosol, peroxisome, plastid	63.49	55.05
CDY17153	Canola	peroxisome	63.49	55.05
AT1G04610.1	Thale cress	cytosol	63.23	54.69
GSMUA_AchrUn_...	Banana	peroxisome	49.21	54.23
GSMUA_Achr1P05290_001	Banana	peroxisome	51.06	54.21
TraesCS4A01G313200.1	Wheat	mitochondrion	58.73	54.15
HORVU5Hr1G050630.3	Barley	mitochondrion, plasma membrane	49.47	54.05
HORVU5Hr1G125560.2	Barley	mitochondrion	58.73	53.62
HORVU2Hr1G001820.1	Barley	plastid	66.4	53.29
GSMUA_Achr4P14020_001	Banana	extracellular, plasma membrane	49.74	52.81
TraesCSU01G065000.1	Wheat	cytosol, endoplasmic reticulum, golgi	29.89	51.83
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	60.05	49.78
HORVU2Hr1G116980.1	Barley	plastid	62.43	49.37
GSMUA_Achr2P19930_001	Banana	cytosol	53.97	49.28
GSMUA_Achr4P03480_001	Banana	extracellular	47.35	48.77
GSMUA_Achr9P05490_001	Banana	cytosol	53.44	48.44
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plastid	50.0	47.61
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	58.99	47.45
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	30.95	47.18
GSMUA_Achr5P06860_001	Banana	peroxisome	53.7	47.1
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	53.44	45.6
GSMUA_Achr4P03000_001	Banana	mitochondrion	45.24	45.48
GSMUA_Achr3P08830_001	Banana	cytosol, peroxisome, plastid	40.48	44.87
EES15155	Sorghum	peroxisome	52.12	44.47
GSMUA_Achr4P14860_001	Banana	peroxisome, plastid	44.97	42.39
GSMUA_Achr8P00130_001	Banana	plasma membrane	38.62	41.13
GSMUA_Achr9P17710_001	Banana	endoplasmic reticulum	39.15	41.0
GSMUA_Achr6P17640_001	Banana	plastid	33.07	38.58
GSMUA_Achr3P10910_001	Banana	endoplasmic reticulum, golgi, vacuole	33.33	37.5
Zm00001d005602_P001	Maize	endoplasmic reticulum	19.31	35.61
GSMUA_Achr3P10900_001	Banana	cytosol, peroxisome, plasma membrane	29.1	34.27
Zm00001d019527_P005	Maize	peroxisome	38.1	33.49
OQU88910	Sorghum	plastid	17.46	29.07
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	52.12	24.17
HORVU7Hr1G007860.1	Barley	cytosol	51.85	23.59

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G25050_001	EnsemblPlants:GSMUA_Achr4P25050_001
EnsemblPlants:GSMUA_Achr4T25050_001	InterPro:IPR036188	UniProt:M0SRW6	PFAM:PF00743	PRINTS:PR00368	PRINTS:PR00469
PANTHER:PTHR43539	PANTHER:PTHR43539:SF2	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI000295E147	SEG:seg

Description

flavin monooxygenase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G25050_001]

Coordinates

chr4:-:24668487..24678005

Molecular Weight (calculated)

41516.8 Da

IEP (calculated)

7.389

GRAVY (calculated)

-0.176

Length

378 amino acids

Sequence
(BLAST)

001: MAGLTEQYDF LSRRCVWVNG PIIVGAGPSG LAVAACLREK DDYPEYPSRK QFIDYLESYA KHFKLSPRFN QSVQSAKYDE TSELWRVRAA GACAEPGNVS
101: ADVEYIGRWL VVATGENAEE VVPELEGLEE FGGDVKHVCD YKSGEAYRGK RVLVVGCGNS GMEVSLDLCD HDASPSMVIR DSVHVLPREV LGKSTFELAI
201: LLMKWLPLWL ADKILLVLAW LVLGNVERFG LRRPSAGPLE LKNTQGKTPV LDIGALGKIR SGDINVVPGI KRLSPGKVEL VDGRLLDVDS IILATGYRSN
301: VPQWLQGCDF FSKDGVPKSP FPNGWKGKSG LYAVGFTRRG LSGASSDAVR TAMDIGRLWG EETNEKRGNI YHLVGRRT

Best Arabidopsis Sequence Match ( AT5G43890.1 )
(BLAST)

001: MENMFRLMGS EDSSDRRRCI WVNGPVIVGA GPSGLATAAC LREEGVPFVV LERADCIASL WQKRTYDRIK LHLPKKVCQL PKMPFPEDYP EYPTKRQFIE
101: YLESYANKFE ITPQFNECVQ SARYDETSGL WRIKTTSSSS SGSEMEYICR WLVVATGENA EKVVPEIDGL TTEFEGEVIH SCEYKSGEKY RGKSVLVVGC
201: GNSGMEVSLD LANHNANASM VVRSSVHVLP REILGKSSFE ISMMLMKWFP LWLVDKILLI LAWLILGNLT KYGLKRPTMG PMELKIVSGK TPVLDIGAME
301: KIKSGEVEIV PGIKRFSRSH VELVDGQRLD LDAVVLATGY RSNVPSWLQE NDLFSKNGFP KSPFPNAWKG KSGLYAAGFT RKGLAGASAD AVNIAQDIGN
401: VWREETKRQK MRTRVGHRRC ISVA

Arabidopsis Description

YUC5Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178UK83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.